RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 PAXBP1Q9Y5B6 917 aa19.85■□□□□ 0.77
PTCH1-227ENST00000553256 PRR5-ARHGAP8B1AHC4 643 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 E9PAM4 449 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 SYNCRIPO60506 623 aaKnown RBP19.84■□□□□ 0.77
PTCH1-227ENST00000553256 SDC4P31431 198 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 ZNF143P52747 638 aaPredicted RBP19.84■□□□□ 0.77
PTCH1-227ENST00000553256 RPS14P62263 151 aaKnown RBP19.84■□□□□ 0.77
PTCH1-227ENST00000553256 ARHGAP8P85298 464 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 ECT2LQ008S8 904 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 SCAPQ12770 1279 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 MAMLD1Q13495 774 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 ASIC2Q16515 512 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 SFMBT2Q5VUG0 894 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 TCEAL6Q6IPX3 200 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 SLC36A4Q6YBV0 504 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 LPCAT2Q7L5N7 544 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 CCDC185Q8N715 623 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 PTPRN2Q92932 1015 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 TCEAL3Q969E4 200 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 NTAN1Q96AB6 310 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 SIPA1Q96FS4 1042 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 OSBPL2Q9H1P3 480 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 FBRSQ9HAH7 460 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 PPARGC1AQ9UBK2 798 aaKnown RBP19.84■□□□□ 0.77
PTCH1-227ENST00000553256 PILRBQ9UKJ0 227 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 CAPN11Q9UMQ6 739 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 USP18Q9UMW8 372 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 DOCK4Q8N1I0 1966 aa19.84■□□□□ 0.77
PTCH1-227ENST00000553256 TTC34A8MYJ7 566 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 FAM72CH0Y354 149 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 TM4SF5O14894 197 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 SIN3BO75182 1162 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 GYPCP04921 128 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 STK19P49842 368 aaPredicted RBP19.83■□□□□ 0.77
PTCH1-227ENST00000553256 CREB5Q02930 508 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 NFKBIBQ15653 356 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 RSPO4Q2I0M5 234 aaPredicted RBP19.83■□□□□ 0.77
PTCH1-227ENST00000553256 FAM72AQ5TYM5 149 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 FAM72DQ6L9T8 149 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 KIAA1324Q6UXG2 1013 aaKnown RBP19.83■□□□□ 0.77
PTCH1-227ENST00000553256 SND1Q7KZF4 910 aaKnown RBP eCLIP19.83■□□□□ 0.77
PTCH1-227ENST00000553256 NLRP14Q86W24 1093 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 FAM72BQ86X60 149 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 ARFGAP1Q8N6T3 406 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 FAM172AQ8WUF8 416 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 FAM129BQ96TA1 746 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 NUP58Q9BVL2 599 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 MPP6Q9NZW5 540 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 IFNKQ9P0W0 207 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 SUN2Q9UH99 717 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 NENFQ9UMX5 172 aa19.83■□□□□ 0.77
PTCH1-227ENST00000553256 RALGAPA1Q6GYQ0 2036 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 PATE3B3GLJ2 98 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 CCP110O43303 1012 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 ATP9BO43861 1147 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 FOXD2O60548 495 aaPredicted RBP19.82■□□□□ 0.76
PTCH1-227ENST00000553256 SKILP12757 684 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 TNFAIP3P21580 790 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 GPD1P21695 349 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 CD6P30203 668 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 ID4P47928 161 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 LIMK1P53667 647 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 OXCT1P55809 520 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 ZBTB16Q05516 673 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF252P-AS1Q0IIN9 211 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 LRSAM1Q6UWE0 723 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 SETD3Q86TU7 594 aaPredicted RBP19.82■□□□□ 0.76
PTCH1-227ENST00000553256 PRCCQ92733 491 aaPredicted RBP19.82■□□□□ 0.76
PTCH1-227ENST00000553256 FAM131CQ96AQ9 280 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 TOE1Q96GM8 510 aaKnown RBP19.82■□□□□ 0.76
PTCH1-227ENST00000553256 RPL10LQ96L21 214 aaKnown RBP19.82■□□□□ 0.76
PTCH1-227ENST00000553256 SELENOOQ9BVL4 669 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 ISCUQ9H1K1 167 aa19.82■□□□□ 0.76
PTCH1-227ENST00000553256 SEPT11Q9NVA2 429 aaKnown RBP19.82■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 A0A0D9SEW6 157 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 TARSL2A2RTX5 802 aaKnown RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 AP5Z1O43299 807 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 ZMPSTE24O75844 475 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 VAV1P15498 845 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 ITPKAP23677 461 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 HNRNPH3P31942 346 aaKnown RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 DHPSP49366 369 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 ZBED6P86452 979 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 RPL6Q02878 288 aaKnown RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 SULT2A1Q06520 285 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF33AQ06730 810 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 SEMA3BQ13214 749 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 ZNF177Q13360 481 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 CDO1Q16878 200 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 DNAJC24Q6P3W2 148 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 SYT12Q8IV01 421 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 MCEEQ96PE7 176 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 XPO4Q9C0E2 1151 aaKnown RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 NDFIP2Q9NV92 336 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 EVLQ9UI08 416 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-227ENST00000553256 HS3ST2Q9Y278 367 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 CHD5Q8TDI0 1954 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 NUMA1Q14980 2115 aa19.81■□□□□ 0.76
PTCH1-227ENST00000553256 LNP1A1A4G5 178 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms