RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 IL1BP01584 269 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 PCSK6P29122 969 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 ARL2P36404 184 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 RPL14P50914 215 aaKnown RBP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 PLK1P53350 603 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 LY6KQ17RY6 165 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 CCDC153Q494R4 210 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 KBTBD6Q86V97 674 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 RYBPQ8N488 228 aaPredicted RBP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 URGCPQ8TCY9 931 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 LRTOMTQ8WZ04 291 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 ACE2Q9BYF1 805 aaPredicted RBP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 COQ10BQ9H8M1 238 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 RAB26Q9ULW5 256 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 LAMB2P55268 1798 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 VILLO15195 856 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 SLC9A4Q6AI14 798 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 EFCAB12Q6NXP0 572 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 PMF1Q6P1K2 205 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 GK5Q6ZS86 529 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 FAM47BQ8NA70 645 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 LPIN3Q9BQK8 851 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 NOL11Q9H8H0 719 aaKnown RBP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 ZDHHC7Q9NXF8 308 aa11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.52
PPFIA2-227ENST00000552948 A0A0A0MRY4 1105 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 A0A1B0GTW7 788 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 RGS20O76081 388 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 VAPBO95292 243 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CKMT2P17540 419 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 SULT1E1P49888 294 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 MXD4Q14582 209 aaPredicted RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 IL23RQ5VWK5 629 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 MAVSQ7Z434 540 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 GIPC3Q8TF64 312 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 MFSD3Q96ES6 412 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 MCRS1Q96EZ8 462 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 SPATA13Q96N96 652 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 C2orf40Q9H1Z8 148 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 TMEM134Q9H6X4 195 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 TRPC7Q9HCX4 862 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 TBC1D23Q9NUY8 699 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 EMCNQ9ULC0 261 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 KIF13BQ9NQT8 1826 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 ZNF839A8K0R7 811 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 HOXC6P09630 235 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 TFPTP0C1Z6 253 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 TFEBP19484 476 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PSMD7P51665 324 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 NAA20P61599 178 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CDKL1Q00532 357 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 MS4A2Q01362 244 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 TNFAIP1Q13829 316 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PPP1R26Q5T8A7 1209 aaPredicted RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 SETD3Q86TU7 594 aaPredicted RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 APBA2Q99767 749 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 LRRC40Q9H9A6 602 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PRPF19Q9UMS4 504 aaKnown RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 STYXL1Q9Y6J8 313 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PENKP01210 267 aaPredicted RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CDK4P11802 303 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 STT3AP46977 705 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 STX1BP61266 288 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 MYBPC1Q00872 1141 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 FSTL4Q6MZW2 842 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PGM2L1Q6PCE3 622 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 C4orf22Q6V702 233 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PATL1Q86TB9 770 aaKnown RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 ZNF354CQ86Y25 554 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 METTL25Q8N6Q8 603 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CLEC4CQ8WTT0 213 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 KCTD4Q8WVF5 259 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 NDRG1Q92597 394 aaKnown RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CNDP1Q96KN2 507 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 SORT1Q99523 831 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 XYLT2Q9H1B5 865 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CDT1Q9H211 546 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PRDM12Q9H4Q4 367 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 PRM3Q9NNZ6 103 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 VANGL2Q9ULK5 521 aa11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 BARX2Q9UMQ3 279 aaPredicted RBP11.82□□□□□ -0.52
PPFIA2-227ENST00000552948 KCNU1A8MYU2 1149 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 XPOTO43592 962 aaKnown RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 TIPRLO75663 272 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 HSPA8P11142 646 aaKnown RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 HNRNPLP14866 589 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 CD1EP15812 388 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 PPARGP37231 505 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 SLC6A3Q01959 620 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 SLC10A2Q12908 348 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms