RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DCAF6Q58WW2 860 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 PITRM1Q5JRX3 1037 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 GBP6Q6ZN66 633 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 MMAAQ8IVH4 418 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 DHX40Q8IX18 779 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 ANKRD20A12PQ8NF67 263 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 DQX1Q8TE96 717 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 GANCQ8TET4 914 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 SLC6A18Q96N87 628 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 BPIFA3Q9BQP9 254 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 NUCKS1Q9H1E3 243 aaKnown RBP12.25□□□□□ -0.45
CKAP4-202ENST00000552828 NDST4Q9H3R1 872 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 PCDHB4Q9Y5E5 795 aa12.25□□□□□ -0.45
CKAP4-202ENST00000552828 A0A1W2PP55 124 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 GTPBP10A4D1E9 387 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 FAM47DPA6NHR8 397 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 SMTNL1A8MU46 457 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 TTC34A8MYJ7 566 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 PES1O00541 588 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 YKT6O15498 198 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 SART1O43290 800 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 RNASEH2AO75792 299 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 LUC7L3O95232 432 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 ADH1BP00325 375 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 TPM2P07951 284 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 C5AR1P21730 350 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 BRD2P25440 801 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CD38P28907 300 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CTSOP43234 321 aaPredicted RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 GPD2P43304 727 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 ECT2LQ008S8 904 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 GCNT1Q02742 428 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CDH18Q13634 790 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 MEA1Q16626 185 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 EXOC3L4Q17RC7 722 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CDKAL1Q5VV42 579 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 MMS22LQ6ZRQ5 1243 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CCDC117Q8IWD4 279 aaPredicted RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 PPM1KQ8N3J5 372 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CARNMT1Q8N4J0 409 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 AADATQ8N5Z0 425 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 STK32AQ8WU08 396 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 TSC1Q92574 1164 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 PTPRN2Q92932 1015 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 KAT5Q92993 513 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 FAM131CQ96AQ9 280 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 LRIG1Q96JA1 1093 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 BBC3Q96PG8 261 aaPredicted RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 OMDQ99983 421 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CRACR2AQ9BSW2 395 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 INTS2Q9H0H0 1204 aaKnown RBP12.24□□□□□ -0.45
CKAP4-202ENST00000552828 ERVMER34-1Q9H9K5 563 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 SLCO3A1Q9UIG8 710 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 CFAP46Q8IYW2 2715 aa12.24□□□□□ -0.45
CKAP4-202ENST00000552828 COL5A1P20908 1838 aaPredicted RBP12.23□□□□□ -0.45
CKAP4-202ENST00000552828 ENC1O14682 589 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 WNT9AO14904 365 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 LATO43561 262 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 MOCS3O95396 460 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 LDOC1O95751 146 aaPredicted RBP12.23□□□□□ -0.45
CKAP4-202ENST00000552828 IGLV3-25P01717 112 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 RXRGP48443 463 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 ZNF165P49910 485 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
CKAP4-202ENST00000552828 ADPRHP54922 357 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 EIF4EBP2Q13542 120 aaPredicted RBP12.23□□□□□ -0.45
CKAP4-202ENST00000552828 SLC12A1Q13621 1099 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 ELAVL3Q14576 367 aaKnown RBP12.23□□□□□ -0.45
CKAP4-202ENST00000552828 ZSCAN23Q3MJ62 389 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 MIIPQ5JXC2 388 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 PRAMEF14Q5SWL7 426 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 SYPL2Q5VXT5 272 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.458e-18■■□□□ 12.9
CKAP4-202ENST00000552828 RRAGAQ7L523 313 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 GATAD2AQ86YP4 633 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 CFAP52Q8N1V2 620 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 BTN2A3PQ96KV6 586 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 FAM81BQ96LP2 452 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 FUCA2Q9BTY2 467 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 TRIM62Q9BVG3 475 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 MIS12Q9H081 205 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
CKAP4-202ENST00000552828 SETXQ7Z333 2677 aaKnown RBP12.23□□□□□ -0.45
CKAP4-202ENST00000552828 BECN2A8MW95 431 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 TLR4O00206 839 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 PLK4O00444 970 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 CALCAP01258 141 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ITGAVP06756 1048 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 SLC9A1P19634 815 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ABCB4P21439 1286 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 PON1P27169 355 aa12.22□□□□□ -0.45
CKAP4-202ENST00000552828 EPHA8P29322 1005 aaPredicted RBP12.22□□□□□ -0.45
CKAP4-202ENST00000552828 ACADSBP45954 432 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms