RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 DKK1O94907 266 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 FBXO21O94952 628 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 LTFP02788 710 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 POLR2EP19388 210 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 CD27P26842 260 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 SGSHP51688 502 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 TBX4P57082 545 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 RPS14P62263 151 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 BNC1Q01954 994 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 GCNT1Q02742 428 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 CETN1Q12798 172 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 LRMPQ12912 555 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 STIM1Q13586 685 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 FAM133BQ5BKY9 247 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 ZNF776Q68DI1 518 aaPredicted RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 PMF1Q6P1K2 205 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 USP30Q70CQ3 517 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 FAM124AQ86V42 546 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 PPM1KQ8N3J5 372 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 KDM1BQ8NB78 822 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 HJURPQ8NCD3 748 aaPredicted RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 ENGASEQ8NFI3 743 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 FIBINQ8TAL6 211 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 SETD7Q8WTS6 366 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 TFAP2BQ92481 460 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 SNX19Q92543 992 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 BIRC7Q96CA5 298 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 DHTKD1Q96HY7 919 aaPredicted RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 PRICKLE1Q96MT3 831 aaPredicted RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 CEP63Q96MT8 703 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 TIGD1Q96MW7 591 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 DDX50Q9BQ39 737 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 ZSWIM1Q9BR11 485 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 TRIM62Q9BVG3 475 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 RSPH9Q9H1X1 276 aaPredicted RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 SGK2Q9HBY8 427 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 SUN2Q9UH99 717 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 SCML1Q9UN30 329 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 PCDHB4Q9Y5E5 795 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 KALRNO60229 2985 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 MUC22E2RYF6 1773 aaPredicted RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 A0A1B0GVT2 93 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 PCDHGA12O60330 932 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 TBL1XO60907 577 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 ASLP04424 464 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 SLC6A4P31645 630 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 CD70P32970 193 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 GRK6P43250 576 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 RPL34P49207 117 aaKnown RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 CSNK1EP49674 416 aaKnown RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 RGS7P49802 495 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 CCT8P50990 548 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 ST8SIA6P61647 398 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 SFSWAPQ12872 951 aaKnown RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 CDH18Q13634 790 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 MEA1Q16626 185 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 KIF19Q2TAC6 998 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 HNRNPA1L2Q32P51 320 aaKnown RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 CCDC40Q4G0X9 1142 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 RFWD3Q6PCD5 774 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 BEND5Q7L4P6 421 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 TMPRSS7Q7RTY8 843 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 SLCO6A1Q86UG4 719 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 MFN1Q8IWA4 741 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 CCDC117Q8IWD4 279 aaPredicted RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 ELOA2Q8IYF1 753 aaPredicted RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 ZNF366Q8N895 744 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 LMO3Q8TAP4 145 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 WFDC5Q8TCV5 224 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 RHBDD1Q8TEB9 315 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 IGSF8Q969P0 613 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 TTC17Q96AE7 1141 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 MYO19Q96H55 970 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 CRELD1Q96HD1 420 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 LMLNQ96KR4 655 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 FCRL2Q96LA5 508 aaPredicted RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 SERPINB11Q96P15 392 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 UBL7Q96S82 380 aaPredicted RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 PABPC3Q9H361 631 aaKnown RBP7.9□□□□□ -1.14
NEK3-201ENST00000550331 TM9SF3Q9HD45 589 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 NCKAP1Q9Y2A7 1128 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 TLR6Q9Y2C9 796 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 ANKRD6Q9Y2G4 727 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 SNX11Q9Y5W9 270 aa7.9□□□□□ -1.14
NEK3-201ENST00000550331 KNL1Q8NG31 2342 aa7.9□□□□□ -1.15
NEK3-201ENST00000550331 MYH10P35580 1976 aa7.9□□□□□ -1.15
NEK3-201ENST00000550331 ZNF462Q96JM2 2506 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 KNTC1P50748 2209 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 CABIN1Q9Y6J0 2220 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 ITIH6Q6UXX5 1313 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 GOLGA6L7A0A1B0GV03 622 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 PIK3R2O00459 728 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 VILLO15195 856 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 PAPSS1O43252 624 aaPredicted RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 TNFSF14O43557 240 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 DFNA5O60443 496 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 RNASEH1O60930 286 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 FSBPO95073 299 aa7.89□□□□□ -1.15
NEK3-201ENST00000550331 LUC7L3O95232 432 aaKnown RBP7.89□□□□□ -1.15
NEK3-201ENST00000550331 GNA14O95837 355 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms