RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
VDR-208ENST00000550325 MYO18AQ92614 2054 aaKnown RBP12.38□□□□□ -0.43
VDR-208ENST00000550325 A0A087WXM4 84 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 KCNU1A8MYU2 1149 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 KCNH1O95259 989 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PIGNO95427 931 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 LTFP02788 710 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 HDCP19113 662 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PTPN7P35236 360 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 IRF9Q00978 393 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 ANO4Q32M45 955 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PIGGQ5H8A4 983 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 GPR180Q86V85 440 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 TMEM130Q8N3G9 435 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 HPS1Q92902 700 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 BIRC8Q96P09 236 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PEBP4Q96S96 227 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 FRMD8P1Q9BZ68 369 aaPredicted RBP12.37□□□□□ -0.43
VDR-208ENST00000550325 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PLAC1Q9HBJ0 212 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PNPLA8Q9NP80 782 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 CLRN2A0PK11 232 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 FAM159BA6NKW6 160 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 ERBB2P04626 1255 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 EEF1DP29692 281 aaKnown RBP12.37□□□□□ -0.43
VDR-208ENST00000550325 AVPR1AP37288 418 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
VDR-208ENST00000550325 CDK18Q07002 472 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PRPSAP1Q14558 356 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 EPGNQ6UW88 154 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 C4orf19Q8IY42 314 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 C17orf50Q8WW18 174 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 TSNARE1Q96NA8 513 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 OLAHQ9NV23 265 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 GTSE1Q9NYZ3 720 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 HES2Q9Y543 173 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 V9GYQ6 96 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 POLRMTO00411 1230 aaKnown RBP12.37□□□□□ -0.43
VDR-208ENST00000550325 YWHAEP62258 255 aaKnown RBP12.37□□□□□ -0.43
VDR-208ENST00000550325 Q3C1V9 767 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 GLRA4Q5JXX5 417 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 NANOGP8Q6NSW7 305 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 PLD5Q8N7P1 536 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 NAT16Q8N8M0 369 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 EFHD1Q9BUP0 239 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 WARS2Q9UGM6 360 aaKnown RBP12.37□□□□□ -0.43
VDR-208ENST00000550325 CYTH4Q9UIA0 394 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 VPS51Q9UID3 782 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 CDYLQ9Y232 598 aa12.37□□□□□ -0.43
VDR-208ENST00000550325 GSRP00390 522 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 ZNF26P17031 533 aaPredicted RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 NAGLUP54802 743 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 STILQ15468 1287 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 LPGAT1Q92604 370 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 RANBP9Q96S59 729 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 DRC3Q9H069 523 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 SDCBP2Q9H190 292 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 SNX15Q9NRS6 342 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 SLC8A2Q9UPR5 921 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 FADS3Q9Y5Q0 445 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 GPC6Q9Y625 555 aaPredicted RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 A8MU76 341 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 KPNA7A9QM74 516 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 USP12O75317 370 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 LSM8O95777 96 aaKnown RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 EPHX2P34913 555 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 PLCL1Q15111 1095 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 DGKDQ16760 1214 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 ZNF829Q3KNS6 432 aaPredicted RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 LZTR1Q8N653 840 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 CCNYQ8ND76 341 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 RP9Q8TA86 221 aaKnown RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 DLG3Q92796 817 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 CCDC167Q9P0B6 97 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 SQORQ9Y6N5 450 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 FAM189A1O60320 539 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 NME5P56597 212 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 PSME3P61289 254 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 OLIG2Q13516 323 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 FAM47CQ5HY64 1035 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 HEATR6Q6AI08 1181 aaKnown RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 SLC2A7Q6PXP3 512 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 TAS1R3Q7RTX0 852 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 RAVER1Q8IY67 606 aaKnown RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 PGAM4Q8N0Y7 254 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 SPATA6LQ8N4H0 392 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 CBR4Q8N4T8 237 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 DCLK2Q8N568 766 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 TMEM102Q8N9M5 508 aaPredicted RBP12.36□□□□□ -0.43
VDR-208ENST00000550325 TAMM41Q96BW9 452 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 WNK4Q96J92 1243 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
VDR-208ENST00000550325 RMDN3Q96TC7 470 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms