RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SIM1P81133 766 aaPredicted RBP16.41■□□□□ 0.22
COX6A1-203ENST00000550009 ST3GAL2Q16842 350 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 CDKAL1Q5VV42 579 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 FAM114A1Q8IWE2 563 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 HDDC3Q8N4P3 179 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 PNPLA1Q8N8W4 532 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 FAM81BQ96LP2 452 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 RPRD1AQ96P16 312 aaPredicted RBP16.41■□□□□ 0.22
COX6A1-203ENST00000550009 SCNM1Q9BWG6 230 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 TMEM121BQ9BXQ6 578 aaPredicted RBP16.41■□□□□ 0.22
COX6A1-203ENST00000550009 CAAP1Q9H8G2 361 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 FBXL12Q9NXK8 326 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 SUN2Q9UH99 717 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 KLK13Q9UKR3 277 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 SARDHQ9UL12 918 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 CEP83Q9Y592 693 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 CELSR3Q9NYQ7 3312 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
COX6A1-203ENST00000550009 ARID1BQ8NFD5 2236 aaPredicted RBP16.41■□□□□ 0.22
COX6A1-203ENST00000550009 GOLGA4Q13439 2230 aaKnown RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 TYW5A2RUC4 315 aaKnown RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 SNAP91O60641 907 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 GLI1P08151 1106 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 SYPP08247 313 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 GNSP15586 552 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 CCR1P32246 355 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 NOS2P35228 1153 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 DPP6P42658 865 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 SULT1E1P49888 294 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 GALCP54803 685 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 CST6Q15828 149 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 KIF19Q2TAC6 998 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 HLA-BQ31612 363 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 PRAMEF14Q5SWL7 426 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 NAA35Q5VZE5 725 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 NCEH1Q6PIU2 408 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 EMC1Q8N766 993 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 ZNF397Q8NF99 534 aaPredicted RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 EPS8L1Q8TE68 723 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 GANCQ8TET4 914 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 FRS2Q8WU20 508 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 PSMB7Q99436 277 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 IRX2Q9BZI1 471 aaPredicted RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 BTBD1Q9H0C5 482 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 TKTL2Q9H0I9 626 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 GAREM1Q9H706 876 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 SYNCQ9H7C4 482 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 TM9SF3Q9HD45 589 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 NOCTQ9UK39 431 aaKnown RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 RALYQ9UKM9 306 aaKnown RBP16.4■□□□□ 0.22
COX6A1-203ENST00000550009 BTBD3Q9Y2F9 522 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 OR51B4Q9Y5P0 310 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 SNX11Q9Y5W9 270 aa16.4■□□□□ 0.22
COX6A1-203ENST00000550009 LAMA5O15230 3695 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 MYLKQ15746 1914 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 K7ERQ8 282 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 MT-CO1P00395 513 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 ASLP04424 464 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 WNT1P04628 370 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
COX6A1-203ENST00000550009 ABCB4P21439 1286 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 GLDCP23378 1020 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 SLC8A1P32418 973 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 DRD3P35462 400 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 MATKP42679 507 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 GABRB2P47870 512 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 ST8SIA6P61647 398 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 PPP2CBP62714 309 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 PPP2CAP67775 309 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 NOMO3P69849 1222 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 IL9RQ01113 521 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 FAM102AQ5T9C2 384 aaPredicted RBP16.39■□□□□ 0.21
COX6A1-203ENST00000550009 RNF219Q5W0B1 726 aaPredicted RBP16.39■□□□□ 0.21
COX6A1-203ENST00000550009 CHCHD4Q8N4Q1 142 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 SLC30A5Q8TAD4 765 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
COX6A1-203ENST00000550009 CFAP57Q96MR6 1250 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 SLC6A18Q96N87 628 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 PCDHB18PQ96TA0 734 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 FEM1AQ9BSK4 669 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 TRIM62Q9BVG3 475 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 HSD3B7Q9H2F3 369 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 FAM207AQ9NSI2 230 aaPredicted RBP16.39■□□□□ 0.21
COX6A1-203ENST00000550009 ARHGEF38Q9NXL2 777 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.39■□□□□ 0.21
COX6A1-203ENST00000550009 MPP6Q9NZW5 540 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 SUSD2Q9UGT4 822 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 ACTL7AQ9Y615 435 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 TRPM6Q9BX84 2022 aa16.39■□□□□ 0.21
COX6A1-203ENST00000550009 EDDM13A0A1B0GTR0 161 aa16.38■□□□□ 0.21
COX6A1-203ENST00000550009 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
COX6A1-203ENST00000550009 TCAF2A6NFQ2 919 aa16.38■□□□□ 0.21
COX6A1-203ENST00000550009 UPK3BL1B0FP48 263 aa16.38■□□□□ 0.21
COX6A1-203ENST00000550009 UPK3BL2E5RIL1 263 aa16.38■□□□□ 0.21
COX6A1-203ENST00000550009 RNASEH2AO75792 299 aaKnown RBP16.38■□□□□ 0.21
COX6A1-203ENST00000550009 ANP32AP39687 249 aaKnown RBP16.38■□□□□ 0.21
COX6A1-203ENST00000550009 CXCR3P49682 368 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms