RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 USP18Q9UMW8 372 aa12.25□□□□□ -0.45
PFDN5-208ENST00000549995 AP4E1Q9UPM8 1137 aa12.25□□□□□ -0.45
PFDN5-208ENST00000549995 REXO2Q9Y3B8 237 aaKnown RBP12.25□□□□□ -0.45
PFDN5-208ENST00000549995 PCDHGA2Q9Y5H1 932 aa12.25□□□□□ -0.45
PFDN5-208ENST00000549995 SNX10Q9Y5X0 201 aa12.25□□□□□ -0.45
PFDN5-208ENST00000549995 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 SOWAHDA6NJG2 315 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 H0Y626 953 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 FGF10O15520 208 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 PJA2O43164 708 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 ATP5BP06576 529 aaKnown RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 CSKP41240 450 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 IL12RB1P42701 662 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 NRLP54845 237 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 SEC13P55735 322 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 SULT2A1Q06520 285 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 ZNF177Q13360 481 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 ZNF234Q14588 700 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 BOLA3Q53S33 107 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 C6orf118Q5T5N4 469 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 CCDC117Q8IWD4 279 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 RTL3Q8N8U3 475 aaKnown RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 SLC35G2Q8TBE7 412 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 TSC1Q92574 1164 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 PPP1R9BQ96SB3 815 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 ACOX2Q99424 681 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 PSMB7Q99436 277 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 EPAS1Q99814 870 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 BAG1Q99933 345 aaPredicted RBP12.24□□□□□ -0.45
PFDN5-208ENST00000549995 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 MAGEB5Q9BZ81 275 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 OSGEPQ9NPF4 335 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 ZSCAN32Q9NX65 697 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 CTTNBP2NLQ9P2B4 639 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 STON1Q9Y6Q2 735 aa12.24□□□□□ -0.45
PFDN5-208ENST00000549995 PRPSAP2O60256 369 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 MOCS3O95396 460 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 APBB3O95704 486 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 TCF4P15884 667 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 POLR2EP19388 210 aaKnown RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 MZF1P28698 734 aaPredicted RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 MAGEA1P43355 309 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 ARSEP51690 589 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 CAMK2GQ13555 558 aaPredicted RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 CA9Q16790 459 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 SCYL2Q6P3W7 929 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 LONP2Q86WA8 852 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 VSIG1Q86XK7 387 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 APCDD1Q8J025 514 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 UMODL1-AS1Q8N2C9 162 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 PYROXD2Q8N2H3 581 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 DCAF4L2Q8NA75 395 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 KCTD15Q96SI1 283 aaPredicted RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 ACE2Q9BYF1 805 aaPredicted RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 NOL6Q9H6R4 1146 aaKnown RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 FBRSQ9HAH7 460 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 LUC7LQ9NQ29 371 aaKnown RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 MPP6Q9NZW5 540 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 RCOR3Q9P2K3 495 aaPredicted RBP12.23□□□□□ -0.45
PFDN5-208ENST00000549995 SLC8A2Q9UPR5 921 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 HS3ST2Q9Y278 367 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 PCDHA13Q9Y5I0 950 aa12.23□□□□□ -0.45
PFDN5-208ENST00000549995 USP34Q70CQ2 3546 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 GOLGA6L3A6NEY3 463 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 GOLGA6L6A8MZA4 724 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 ZNF487B1APH4 448 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 ZMPSTE24O75844 475 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 RHOCP08134 193 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 RARAP10276 462 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 HOXB2P14652 356 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 PRKCHP24723 683 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 CNR2P34972 360 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 VAV2P52735 878 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 COPAP53621 1224 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 YBEYP58557 167 aaPredicted RBP12.22□□□□□ -0.45
PFDN5-208ENST00000549995 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
PFDN5-208ENST00000549995 DPYSQ14117 519 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 DAB2IPQ5VWQ8 1189 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 TXNRD3NBQ6F5E7 133 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 CHPFQ8IZ52 775 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 CIPCQ9C0C6 399 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 KLC2Q9H0B6 622 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 MAGEH1Q9H213 219 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 LRRC19Q9H756 370 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 POLMQ9NP87 494 aaPredicted RBP12.22□□□□□ -0.45
PFDN5-208ENST00000549995 NDFIP2Q9NV92 336 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 CACNA2D2Q9NY47 1150 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 ERVW-1Q9UQF0 538 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 SPAG17Q6Q759 2223 aa12.22□□□□□ -0.45
PFDN5-208ENST00000549995 TARSL2A2RTX5 802 aaKnown RBP12.21□□□□□ -0.45
PFDN5-208ENST00000549995 RCCD1A6NED2 376 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 H0Y858 1186 aa12.21□□□□□ -0.45
PFDN5-208ENST00000549995 ATP9BO43861 1147 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms