RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 LIN37Q96GY3 246 aaPredicted RBP8.8□□□□□ -1
TROAP-208ENST00000548817 CCNL2Q96S94 520 aaPredicted RBP8.8□□□□□ -1
TROAP-208ENST00000548817 IRX2Q9BZI1 471 aaPredicted RBP8.8□□□□□ -1
TROAP-208ENST00000548817 SCAND2PQ9GZW5 306 aaPredicted RBP8.8□□□□□ -1
TROAP-208ENST00000548817 ABCB8Q9NUT2 735 aa8.8□□□□□ -1
TROAP-208ENST00000548817 RMND1Q9NWS8 449 aa8.8□□□□□ -1
TROAP-208ENST00000548817 SFMBT1Q9UHJ3 866 aa8.8□□□□□ -1
TROAP-208ENST00000548817 GGA2Q9UJY4 613 aa8.8□□□□□ -1
TROAP-208ENST00000548817 TSPAN16Q9UKR8 245 aa8.8□□□□□ -1
TROAP-208ENST00000548817 ATXN7L1Q9ULK2 861 aaPredicted RBP8.8□□□□□ -1
TROAP-208ENST00000548817 CLEC4EQ9ULY5 219 aa8.8□□□□□ -1
TROAP-208ENST00000548817 HPSEQ9Y251 543 aa8.8□□□□□ -1
TROAP-208ENST00000548817 BSNQ9UPA5 3926 aa8.8□□□□□ -1
TROAP-208ENST00000548817 PLXNA2O75051 1894 aa8.8□□□□□ -1
TROAP-208ENST00000548817 IRAK2O43187 625 aa8.79□□□□□ -1
TROAP-208ENST00000548817 TBL1XO60907 577 aa8.79□□□□□ -1
TROAP-208ENST00000548817 MOCS3O95396 460 aa8.79□□□□□ -1
TROAP-208ENST00000548817 GP1BAP07359 652 aa8.79□□□□□ -1
TROAP-208ENST00000548817 PRR29P0C7W0 189 aa8.79□□□□□ -1
TROAP-208ENST00000548817 SETSIPP0DME0 302 aa8.79□□□□□ -1
TROAP-208ENST00000548817 LCP1P13796 627 aa8.79□□□□□ -1
TROAP-208ENST00000548817 TBXAS1P24557 533 aaPredicted RBP8.79□□□□□ -1
TROAP-208ENST00000548817 HOXD9P28356 352 aaPredicted RBP8.79□□□□□ -1
TROAP-208ENST00000548817 CD38P28907 300 aa8.79□□□□□ -1
TROAP-208ENST00000548817 HLA-FP30511 346 aa8.79□□□□□ -1
TROAP-208ENST00000548817 RPS14P62263 151 aaKnown RBP8.79□□□□□ -1
TROAP-208ENST00000548817 NUCB2P80303 420 aa8.79□□□□□ -1
TROAP-208ENST00000548817 ADIGQ0VDE8 80 aa8.79□□□□□ -1
TROAP-208ENST00000548817 CETN1Q12798 172 aa8.79□□□□□ -1
TROAP-208ENST00000548817 ZNF211Q13398 564 aaPredicted RBP8.79□□□□□ -1
TROAP-208ENST00000548817 CUL2Q13617 745 aa8.79□□□□□ -1
TROAP-208ENST00000548817 LINC00303Q3SY05 128 aa8.79□□□□□ -1
TROAP-208ENST00000548817 SLC45A4Q5BKX6 768 aa8.79□□□□□ -1
TROAP-208ENST00000548817 NUGGCQ68CJ6 796 aa8.79□□□□□ -1
TROAP-208ENST00000548817 TMEM215Q68D42 235 aa8.79□□□□□ -1
TROAP-208ENST00000548817 KRBA2Q6ZNG9 492 aa8.79□□□□□ -1
TROAP-208ENST00000548817 ZNF366Q8N895 744 aa8.79□□□□□ -1
TROAP-208ENST00000548817 UBA3Q8TBC4 463 aa8.79□□□□□ -1
TROAP-208ENST00000548817 NDRG1Q92597 394 aaKnown RBP8.79□□□□□ -1
TROAP-208ENST00000548817 SLC6A18Q96N87 628 aa8.79□□□□□ -1
TROAP-208ENST00000548817 GTPBP4Q9BZE4 634 aaKnown RBP8.79□□□□□ -1
TROAP-208ENST00000548817 PRSS16Q9NQE7 514 aa8.79□□□□□ -1
TROAP-208ENST00000548817 CNGB3Q9NQW8 809 aa8.79□□□□□ -1
TROAP-208ENST00000548817 STIM2Q9P246 746 aa8.79□□□□□ -1
TROAP-208ENST00000548817 SCML1Q9UN30 329 aa8.79□□□□□ -1
TROAP-208ENST00000548817 CEP83Q9Y592 693 aa8.79□□□□□ -1
TROAP-208ENST00000548817 PCDHGA8Q9Y5G5 932 aa8.79□□□□□ -1
TROAP-208ENST00000548817 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
TROAP-208ENST00000548817 A0A1W2PR77 199 aa8.78□□□□□ -1
TROAP-208ENST00000548817 GOLGA6L4A6NEF3 574 aa8.78□□□□□ -1
TROAP-208ENST00000548817 FAM47DPA6NHR8 397 aa8.78□□□□□ -1
TROAP-208ENST00000548817 LRRC72A6NJI9 287 aa8.78□□□□□ -1
TROAP-208ENST00000548817 YJEFN3A6XGL0 299 aa8.78□□□□□ -1
TROAP-208ENST00000548817 E7ENQ6 273 aa8.78□□□□□ -1
TROAP-208ENST00000548817 SLC16A3O15427 465 aaKnown RBP8.78□□□□□ -1
TROAP-208ENST00000548817 OPA1O60313 960 aa8.78□□□□□ -1
TROAP-208ENST00000548817 CSO75390 466 aaKnown RBP8.78□□□□□ -1
TROAP-208ENST00000548817 ZNF202O95125 648 aa8.78□□□□□ -1
TROAP-208ENST00000548817 SMC2O95347 1197 aa8.78□□□□□ -1
TROAP-208ENST00000548817 ASLP04424 464 aa8.78□□□□□ -1
TROAP-208ENST00000548817 TBX4P57082 545 aa8.78□□□□□ -1
TROAP-208ENST00000548817 NXPH1P58417 271 aa8.78□□□□□ -1
TROAP-208ENST00000548817 FOXK1P85037 733 aa8.78□□□□□ -1
TROAP-208ENST00000548817 NFKB2Q00653 900 aa8.78□□□□□ -1
TROAP-208ENST00000548817 FKBP3Q00688 224 aaKnown RBP8.78□□□□□ -1
TROAP-208ENST00000548817 LRMPQ12912 555 aa8.78□□□□□ -1
TROAP-208ENST00000548817 STIM1Q13586 685 aa8.78□□□□□ -1
TROAP-208ENST00000548817 PKP1Q13835 747 aa8.78□□□□□ -1
TROAP-208ENST00000548817 STILQ15468 1287 aa8.78□□□□□ -1
TROAP-208ENST00000548817 PRAMEF14Q5SWL7 426 aa8.78□□□□□ -1
TROAP-208ENST00000548817 MPP7Q5T2T1 576 aa8.78□□□□□ -1
TROAP-208ENST00000548817 RNF219Q5W0B1 726 aaPredicted RBP8.78□□□□□ -1
TROAP-208ENST00000548817 USP30Q70CQ3 517 aa8.78□□□□□ -1
TROAP-208ENST00000548817 USP53Q70EK8 1073 aa8.78□□□□□ -1
TROAP-208ENST00000548817 CLEC14AQ86T13 490 aa8.78□□□□□ -1
TROAP-208ENST00000548817 MFN1Q8IWA4 741 aa8.78□□□□□ -1
TROAP-208ENST00000548817 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.78□□□□□ -1
TROAP-208ENST00000548817 RBBP8NLQ8NC74 664 aaPredicted RBP8.78□□□□□ -1
TROAP-208ENST00000548817 HJURPQ8NCD3 748 aaPredicted RBP8.78□□□□□ -1
TROAP-208ENST00000548817 KCTD13Q8WZ19 329 aa8.78□□□□□ -1
TROAP-208ENST00000548817 IRGQQ8WZA9 623 aa8.78□□□□□ -1
TROAP-208ENST00000548817 SGF29Q96ES7 293 aa8.78□□□□□ -1
TROAP-208ENST00000548817 EEF2KMTQ96G04 330 aa8.78□□□□□ -1
TROAP-208ENST00000548817 P2RY11Q96G91 374 aa8.78□□□□□ -1
TROAP-208ENST00000548817 SLC46A1Q96NT5 459 aa8.78□□□□□ -1
TROAP-208ENST00000548817 OMDQ99983 421 aa8.78□□□□□ -1
TROAP-208ENST00000548817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.78□□□□□ -1
TROAP-208ENST00000548817 TMEM245Q9H330 911 aa8.78□□□□□ -1
TROAP-208ENST00000548817 LRRC4CQ9HCJ2 640 aa8.78□□□□□ -1
TROAP-208ENST00000548817 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
TROAP-208ENST00000548817 FBXL12Q9NXK8 326 aa8.78□□□□□ -1
TROAP-208ENST00000548817 ARMCX3Q9UH62 379 aaPredicted RBP8.78□□□□□ -1
TROAP-208ENST00000548817 HOOK1Q9UJC3 728 aaKnown RBP8.78□□□□□ -1
TROAP-208ENST00000548817 STOML2Q9UJZ1 356 aa8.78□□□□□ -1
TROAP-208ENST00000548817 PCDHB4Q9Y5E5 795 aa8.78□□□□□ -1
TROAP-208ENST00000548817 FAM237AA0A1B0GTK4 181 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 A0A1W2PQ27 194 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 A0A1W2PQ64 194 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 CDRT15L2A8MXV6 281 aa8.77□□□□□ -1.01
TROAP-208ENST00000548817 TLR4O00206 839 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms