RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 EIF4E1BA6NMX2 242 aaKnown RBP17.01■□□□□ 0.31
SSH1-208ENST00000548522 C1QL1O75973 258 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 FBXO21O94952 628 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 IL1BP01584 269 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 SRPRAP08240 638 aaKnown RBP17.01■□□□□ 0.31
SSH1-208ENST00000548522 GOT1P17174 413 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 ZC3H12AQ5D1E8 599 aaKnown RBP17.01■□□□□ 0.31
SSH1-208ENST00000548522 SFMBT2Q5VUG0 894 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 DENND1BQ6P3S1 775 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 FBXL19Q6PCT2 694 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 KANSL1Q7Z3B3 1105 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 CHSY1Q86X52 802 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 KDM1BQ8NB78 822 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 LMO3Q8TAP4 145 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 TSC1Q92574 1164 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 HSFY1Q96LI6 401 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
SSH1-208ENST00000548522 ST7Q9NRC1 585 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 CA5BQ9Y2D0 317 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 RAI2Q9Y5P3 530 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 MGAQ8IWI9 3026 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 PTPRQQ9UMZ3 2332 aa17.01■□□□□ 0.31
SSH1-208ENST00000548522 E9PAM4 449 aa17■□□□□ 0.31
SSH1-208ENST00000548522 TLR4O00206 839 aa17■□□□□ 0.31
SSH1-208ENST00000548522 LATO43561 262 aa17■□□□□ 0.31
SSH1-208ENST00000548522 SDC3O75056 442 aa17■□□□□ 0.31
SSH1-208ENST00000548522 RTN2O75298 545 aa17■□□□□ 0.31
SSH1-208ENST00000548522 PDGFRAP16234 1089 aa17■□□□□ 0.31
SSH1-208ENST00000548522 TACR2P21452 398 aa17■□□□□ 0.31
SSH1-208ENST00000548522 C5AR1P21730 350 aa17■□□□□ 0.31
SSH1-208ENST00000548522 MAT2AP31153 395 aaKnown RBP17■□□□□ 0.31
SSH1-208ENST00000548522 HNF1BP35680 557 aa17■□□□□ 0.31
SSH1-208ENST00000548522 EIF2S3P41091 472 aaKnown RBP17■□□□□ 0.31
SSH1-208ENST00000548522 NNTQ13423 1086 aa17■□□□□ 0.31
SSH1-208ENST00000548522 POM121L1PQ3SYA9 428 aa17■□□□□ 0.31
SSH1-208ENST00000548522 COBLL1Q53SF7 1204 aa17■□□□□ 0.31
SSH1-208ENST00000548522 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
SSH1-208ENST00000548522 RNF219Q5W0B1 726 aaPredicted RBP17■□□□□ 0.31
SSH1-208ENST00000548522 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.31
SSH1-208ENST00000548522 FMR1NBQ8N0W7 255 aaPredicted RBP17■□□□□ 0.31
SSH1-208ENST00000548522 KREMEN1Q96MU8 473 aa17■□□□□ 0.31
SSH1-208ENST00000548522 SCAND2PQ9GZW5 306 aaPredicted RBP17■□□□□ 0.31
SSH1-208ENST00000548522 RMND1Q9NWS8 449 aa17■□□□□ 0.31
SSH1-208ENST00000548522 ARHGAP20Q9P2F6 1191 aa17■□□□□ 0.31
SSH1-208ENST00000548522 NYNRINQ9P2P1 1898 aaKnown RBP17■□□□□ 0.31
SSH1-208ENST00000548522 CYTH4Q9UIA0 394 aa17■□□□□ 0.31
SSH1-208ENST00000548522 SARDHQ9UL12 918 aa17■□□□□ 0.31
SSH1-208ENST00000548522 KNTC1P50748 2209 aa17■□□□□ 0.31
SSH1-208ENST00000548522 ATMQ13315 3056 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 ADH1BP00325 375 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 CD44P16070 742 aaKnown RBP16.99■□□□□ 0.31
SSH1-208ENST00000548522 GPD2P43304 727 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 RPL34P49207 117 aaKnown RBP16.99■□□□□ 0.31
SSH1-208ENST00000548522 ARRB1P49407 418 aaPredicted RBP16.99■□□□□ 0.31
SSH1-208ENST00000548522 IRAK1P51617 712 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 LRRC63Q05C16 580 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 ELAVL3Q14576 367 aaKnown RBP16.99■□□□□ 0.31
SSH1-208ENST00000548522 NAPEPLDQ6IQ20 393 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.99■□□□□ 0.31
SSH1-208ENST00000548522 FRS2Q8WU20 508 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 SKA1Q96BD8 255 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 PRORYQ9H606 182 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 ACP6Q9NPH0 428 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 TJP2Q9UDY2 1190 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 AK5Q9Y6K8 562 aa16.99■□□□□ 0.31
SSH1-208ENST00000548522 ZNF462Q96JM2 2506 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3DA0A087WVF3 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3IA0A087WXS9 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3EA0A087X179 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3KA0A087X1G2 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3FA6NER0 549 aaPredicted RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3LB9A6J9 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 MOCS3O95396 460 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 IGLV3-25P01717 112 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3HP0C7X1 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 CENPCQ03188 943 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 SFSWAPQ12872 951 aaKnown RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 STILQ15468 1287 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TAF5Q15542 800 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3GQ6DHY5 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3CQ6IPX1 549 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 CXorf57Q6NSI4 855 aaKnown RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 CCDC117Q8IWD4 279 aaPredicted RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 TBC1D3Q8IZP1 549 aaPredicted RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 CCAR2Q8N163 923 aaKnown RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 OR52K2Q8NGK3 314 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 FAM131CQ96AQ9 280 aa16.98■□□□□ 0.31
SSH1-208ENST00000548522 UBL7Q96S82 380 aaPredicted RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 PRMT1Q99873 361 aaKnown RBP16.98■□□□□ 0.31
SSH1-208ENST00000548522 E5RJQ4 531 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 CAPN9O14815 690 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 YKT6O15498 198 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 TRUB2O95900 331 aaKnown RBP16.97■□□□□ 0.31
SSH1-208ENST00000548522 APOEP02649 317 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 C1SP09871 688 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 GGCXP38435 758 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 RXRGP48443 463 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 CCDC40Q4G0X9 1142 aa16.97■□□□□ 0.31
SSH1-208ENST00000548522 AGBL4Q5VU57 503 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms