RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KLF10Q13118 480 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 SEMA3AQ14563 771 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 BAK1Q16611 211 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 PROSER3Q2NL68 480 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 SLC4A8Q2Y0W8 1093 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 GLE1Q53GS7 698 aaKnown RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 LIPMQ5VYY2 423 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 TMEM65Q6PI78 240 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 ZNF474Q6S9Z5 364 aaPredicted RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 SYNE3Q6ZMZ3 975 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 LSM14AQ8ND56 463 aaKnown RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 ADPRHL1Q8NDY3 354 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 GPR150Q8NGU9 434 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 CELF1Q92879 486 aaKnown RBP4.53□□□□□ -1.68
PTCH1-216ENST00000548379 HVCN1Q96D96 273 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 RITA1Q96K30 269 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 HS6ST2Q96MM7 605 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 GPR78Q96P69 363 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 PCED1AQ9H1Q7 454 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 JMJD4Q9H9V9 463 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 IL21RQ9HBE5 538 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 CPNE5Q9HCH3 593 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 TXNRD2Q9NNW7 524 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 ASB6Q9NWX5 421 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 GDAQ9Y2T3 454 aa4.53□□□□□ -1.68
PTCH1-216ENST00000548379 SAMD9Q5K651 1589 aa4.53□□□□□ -1.69
PTCH1-216ENST00000548379 ARHGAP5Q13017 1502 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ARHGEF12Q9NZN5 1544 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 AOX1Q06278 1338 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 RIMS1Q86UR5 1692 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 CTTNBP2Q8WZ74 1663 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 IQSEC2Q5JU85 1478 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 B4E171 279 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 PROP1O75360 226 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 METTL18O95568 372 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 SLC3A2P08195 630 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 HNRNPA1P09651 372 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ALDOCP09972 364 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 LYL1P12980 280 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 GPD1P21695 349 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ELF1P32519 619 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 TSPAN7P41732 249 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 SOX2P48431 317 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ADPRHP54922 357 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 B4GALNT1Q00973 533 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 FHL2Q14192 279 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 AWAT1Q58HT5 328 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 SLC9C2Q5TAH2 1124 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 RANBP10Q6VN20 620 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 DBX2Q6ZNG2 339 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 TFAP2DQ7Z6R9 452 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 AMIGO2Q86SJ2 522 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 SCN4BQ8IWT1 228 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ANKRD44Q8N8A2 993 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 PPHLN1Q8NEY8 458 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ST8SIA4Q92187 359 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 RBM17Q96I25 401 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 FUZQ9BT04 418 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 CLPBQ9H078 707 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 NUAK2Q9H093 628 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 TAOK3Q9H2K8 898 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 STN1Q9H668 368 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 PRDM16Q9HAZ2 1276 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 TLR8Q9NR97 1041 aaKnown RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 THAP1Q9NVV9 213 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 SH3BP4Q9P0V3 963 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 ING1Q9UK53 422 aaPredicted RBP4.52□□□□□ -1.69
PTCH1-216ENST00000548379 HSF4Q9ULV5 492 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 TBX20Q9UMR3 447 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 PKP3Q9Y446 797 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 DMRT1Q9Y5R6 373 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 WNT6Q9Y6F9 365 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 HECW1Q76N89 1606 aa4.52□□□□□ -1.69
PTCH1-216ENST00000548379 SPAG9O60271 1321 aaKnown RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 C17orf100A8MU93 164 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 CYR61O00622 381 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 RRHO14718 337 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 GCATO75600 419 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 CD4P01730 458 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 ENO1P06733 434 aaKnown RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 CPA1P15085 419 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TNFAIP3P21580 790 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TGM2P21980 687 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 RXRGP48443 463 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 VPS41P49754 854 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TFF2Q03403 129 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TBL3Q12788 808 aaKnown RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 SEC23BQ15437 767 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 GPR162Q16538 588 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 PRICKLE4Q2TBC4 344 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 AKNAD1Q5T1N1 836 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 NAA35Q5VZE5 725 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 TMED8Q6PL24 325 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 LRRC8DQ7L1W4 858 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.51□□□□□ -1.69
PTCH1-216ENST00000548379 CHSY1Q86X52 802 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 OR52N4Q8NGI2 321 aa4.51□□□□□ -1.69
PTCH1-216ENST00000548379 RFFLQ8WZ73 363 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms