RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 TBC1D3GQ6DHY5 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TTLL5Q6EMB2 1281 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3CQ6IPX1 549 aa2.59□□□□□ -2
CEP290-204ENST00000547926 B4GALNT4Q76KP1 1039 aa2.59□□□□□ -2
CEP290-204ENST00000547926 RTL10Q7L3V2 364 aa2.59□□□□□ -2
CEP290-204ENST00000547926 MDGA2Q7Z553 956 aa2.59□□□□□ -2
CEP290-204ENST00000547926 TBC1D3Q8IZP1 549 aaPredicted RBP2.59□□□□□ -2
CEP290-204ENST00000547926 SPICE1Q8N0Z3 855 aa2.59□□□□□ -2
CEP290-204ENST00000547926 POF1BQ8WVV4 589 aa2.59□□□□□ -2
CEP290-204ENST00000547926 RTKNQ9BST9 563 aa2.59□□□□□ -2
CEP290-204ENST00000547926 PCGF6Q9BYE7 350 aa2.59□□□□□ -2
CEP290-204ENST00000547926 PABPC3Q9H361 631 aaKnown RBP2.59□□□□□ -2
CEP290-204ENST00000547926 TXNRD2Q9NNW7 524 aa2.59□□□□□ -2
CEP290-204ENST00000547926 SEMA4BQ9NPR2 832 aaPredicted RBP2.59□□□□□ -2
CEP290-204ENST00000547926 PRDM8Q9NQV8 689 aa2.59□□□□□ -2
CEP290-204ENST00000547926 LRFN1Q9P244 771 aa2.59□□□□□ -2
CEP290-204ENST00000547926 PCDHA10Q9Y5I2 948 aa2.59□□□□□ -2
CEP290-204ENST00000547926 CXorf65A6NEN9 183 aa2.58□□□□□ -2
CEP290-204ENST00000547926 PRSS47A8MTI9 375 aa2.58□□□□□ -2
CEP290-204ENST00000547926 F5H423 210 aaPredicted RBP2.58□□□□□ -2
CEP290-204ENST00000547926 SYT5O00445 386 aa2.58□□□□□ -2
CEP290-204ENST00000547926 ACTL6BO94805 426 aa2.58□□□□□ -2
CEP290-204ENST00000547926 EPN2O95208 641 aa2.58□□□□□ -2
CEP290-204ENST00000547926 NFATC1O95644 943 aa2.58□□□□□ -2
CEP290-204ENST00000547926 PLGP00747 810 aaPredicted RBP2.58□□□□□ -2
CEP290-204ENST00000547926 ITGA2BP08514 1039 aa2.58□□□□□ -2
CEP290-204ENST00000547926 HMGB1P09429 215 aaKnown RBP2.58□□□□□ -2
CEP290-204ENST00000547926 TRIM14Q14142 442 aa2.58□□□□□ -2
CEP290-204ENST00000547926 BRD3Q15059 726 aa2.58□□□□□ -2
CEP290-204ENST00000547926 PIK3CD-AS1Q5SR53 167 aa2.58□□□□□ -2
CEP290-204ENST00000547926 SULT6B1Q6IMI4 303 aa2.58□□□□□ -2
CEP290-204ENST00000547926 DDIASQ8IXT1 998 aa2.58□□□□□ -2
CEP290-204ENST00000547926 PAQR4Q8N4S7 273 aaPredicted RBP2.58□□□□□ -2
CEP290-204ENST00000547926 SLC44A5Q8NCS7 719 aa2.58□□□□□ -2
CEP290-204ENST00000547926 DNASE2BQ8WZ79 361 aa2.58□□□□□ -2
CEP290-204ENST00000547926 SLC25A28Q96A46 364 aa2.58□□□□□ -2
CEP290-204ENST00000547926 ADAD1Q96M93 576 aaKnown RBP2.58□□□□□ -2
CEP290-204ENST00000547926 ARHGAP39Q9C0H5 1083 aa2.58□□□□□ -2
CEP290-204ENST00000547926 SFXN1Q9H9B4 322 aa2.58□□□□□ -2
CEP290-204ENST00000547926 ERRFI1Q9UJM3 462 aaPredicted RBP2.58□□□□□ -2
CEP290-204ENST00000547926 NFU1Q9UMS0 254 aa2.58□□□□□ -2
CEP290-204ENST00000547926 LAMP3Q9UQV4 416 aa2.58□□□□□ -2
CEP290-204ENST00000547926 RCE1Q9Y256 329 aa2.58□□□□□ -2
CEP290-204ENST00000547926 IGLV5-39A0A0G2JS06 123 aa2.57□□□□□ -2
CEP290-204ENST00000547926 C3orf70A6NLC5 250 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 B4DGG1 531 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RHODO00212 210 aa2.57□□□□□ -2
CEP290-204ENST00000547926 TULP3O75386 442 aa2.57□□□□□ -2
CEP290-204ENST00000547926 LARGE1O95461 756 aa2.57□□□□□ -2
CEP290-204ENST00000547926 CHRNB1P11230 501 aa2.57□□□□□ -2
CEP290-204ENST00000547926 ICA1Q05084 483 aa2.57□□□□□ -2
CEP290-204ENST00000547926 ZBTB16Q05516 673 aa2.57□□□□□ -2
CEP290-204ENST00000547926 GALNTL6Q49A17 601 aa2.57□□□□□ -2
CEP290-204ENST00000547926 MANEAQ5SRI9 462 aa2.57□□□□□ -2
CEP290-204ENST00000547926 LRIG3Q6UXM1 1119 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RRAGAQ7L523 313 aa2.57□□□□□ -2
CEP290-204ENST00000547926 NR2C2APQ86WQ0 139 aa2.57□□□□□ -2
CEP290-204ENST00000547926 SLC44A2Q8IWA5 706 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 FAM47BQ8NA70 645 aa2.57□□□□□ -2
CEP290-204ENST00000547926 MPLKIPQ8TAP9 179 aa2.57□□□□□ -2
CEP290-204ENST00000547926 STT3BQ8TCJ2 826 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RSC1A1Q92681 617 aa2.57□□□□□ -2
CEP290-204ENST00000547926 EID2BQ96D98 161 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RMDN3Q96TC7 470 aa2.57□□□□□ -2
CEP290-204ENST00000547926 HTATIP2Q9BUP3 242 aa2.57□□□□□ -2
CEP290-204ENST00000547926 BRD8Q9H0E9 1235 aa2.57□□□□□ -2
CEP290-204ENST00000547926 FAM234AQ9H0X4 552 aa2.57□□□□□ -2
CEP290-204ENST00000547926 LIN7CQ9NUP9 197 aaKnown RBP2.57□□□□□ -2
CEP290-204ENST00000547926 DACT1Q9NYF0 836 aa2.57□□□□□ -2
CEP290-204ENST00000547926 GRHPRQ9UBQ7 328 aa2.57□□□□□ -2
CEP290-204ENST00000547926 SLC8A2Q9UPR5 921 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RP1L1Q8IWN7 2480 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 PRPF4O43172 522 aaKnown RBP eCLIP2.57□□□□□ -2
CEP290-204ENST00000547926 CSTBP04080 98 aaKnown RBP2.57□□□□□ -2
CEP290-204ENST00000547926 CIITAP33076 1130 aa2.57□□□□□ -2
CEP290-204ENST00000547926 AP2B1P63010 937 aa2.57□□□□□ -2
CEP290-204ENST00000547926 CHAF1AQ13111 956 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 DLGAP5Q15398 846 aa2.57□□□□□ -2
CEP290-204ENST00000547926 TWIST1Q15672 202 aa2.57□□□□□ -2
CEP290-204ENST00000547926 INPP5JQ15735 1006 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 LRRC24Q50LG9 513 aa2.57□□□□□ -2
CEP290-204ENST00000547926 C6orf10Q5SRN2 563 aa2.57□□□□□ -2
CEP290-204ENST00000547926 TTC22Q5TAA0 569 aa2.57□□□□□ -2
CEP290-204ENST00000547926 ATPAF1Q5TC12 328 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 HMBOX1Q6NT76 420 aa2.57□□□□□ -2
CEP290-204ENST00000547926 NFRKBQ6P4R8 1299 aa2.57□□□□□ -2
CEP290-204ENST00000547926 CCDC174Q6PII3 467 aa2.57□□□□□ -2
CEP290-204ENST00000547926 KLHL17Q6TDP4 642 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RFX8Q6ZV50 586 aa2.57□□□□□ -2
CEP290-204ENST00000547926 RASGRP2Q7LDG7 609 aa2.57□□□□□ -2
CEP290-204ENST00000547926 PIM3Q86V86 326 aa2.57□□□□□ -2
CEP290-204ENST00000547926 GPSM1Q86YR5 675 aa2.57□□□□□ -2
CEP290-204ENST00000547926 CACNA2D3Q8IZS8 1091 aa2.57□□□□□ -2
CEP290-204ENST00000547926 ADPRHL1Q8NDY3 354 aa2.57□□□□□ -2
CEP290-204ENST00000547926 THOC3Q96J01 351 aaKnown RBP2.57□□□□□ -2
CEP290-204ENST00000547926 NLRP4Q96MN2 994 aa2.57□□□□□ -2
CEP290-204ENST00000547926 SLITRK1Q96PX8 696 aa2.57□□□□□ -2
CEP290-204ENST00000547926 HDHD5Q9BXW7 423 aa2.57□□□□□ -2
CEP290-204ENST00000547926 FRMD8Q9BZ67 464 aaPredicted RBP2.57□□□□□ -2
CEP290-204ENST00000547926 ELAC1Q9H777 363 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms