RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NCEH1Q6PIU2 408 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 IL27RAQ6UWB1 636 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 SLC26A9Q7LBE3 791 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 RAB44Q7Z6P3 723 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-204ENST00000547486 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 AADATQ8N5Z0 425 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 PNPLA1Q8N8W4 532 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-204ENST00000547486 SETD7Q8WTS6 366 aaKnown RBP13.76□□□□□ -0.21
CPSF6-204ENST00000547486 FRS2Q8WU20 508 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-204ENST00000547486 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 NPY6RQ99463 290 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
CPSF6-204ENST00000547486 ZMIZ1Q9ULJ6 1067 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 VANGL2Q9ULK5 521 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 SCML1Q9UN30 329 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 MSRB2Q9Y3D2 182 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 NEUROG3Q9Y4Z2 214 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 CEP83Q9Y592 693 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 PCDHB9Q9Y5E1 797 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 SNX10Q9Y5X0 201 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 FHOD1Q9Y613 1164 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 USP24Q9UPU5 2620 aa13.76□□□□□ -0.21
CPSF6-204ENST00000547486 CEP295Q9C0D2 2601 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 TCAF2A6NFQ2 919 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 WNT9AO14904 365 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 PAGE1O75459 146 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 DAB1O75553 588 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
CPSF6-204ENST00000547486 ADCY5O95622 1261 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 CER1O95813 267 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 CYP11B1P15538 503 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 NOS2P35228 1153 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 BPIFB4P59827 614 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
CPSF6-204ENST00000547486 SLC12A1Q13621 1099 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 RAPGEF1Q13905 1077 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 KCNJ12Q14500 433 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 RABGAP1LQ5R372 815 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 RNF219Q5W0B1 726 aaPredicted RBP13.75□□□□□ -0.21
CPSF6-204ENST00000547486 NT5C3BQ969T7 300 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 FEM1AQ9BSK4 669 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 NUP62CLQ9H1M0 184 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 SYNCQ9H7C4 482 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 PIGVQ9NUD9 493 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 ADAMTS1Q9UHI8 967 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 BTBD3Q9Y2F9 522 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 OR51B4Q9Y5P0 310 aa13.75□□□□□ -0.21
CPSF6-204ENST00000547486 AKAP13Q12802 2813 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 WDFY3Q8IZQ1 3526 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 A0A1W2PPC4 97 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 H0Y8X5 98 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 PLK4O00444 970 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 CNTN5O94779 1100 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TRIM16O95361 564 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 UCHL3P15374 230 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 GOT1P17174 413 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 CDH5P33151 784 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-204ENST00000547486 GABRB2P47870 512 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 GRIA4P48058 902 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 PSMD8P48556 350 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 CXCR3P49682 368 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 ZNF423Q2M1K9 1284 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TCP11X2Q5H9J9 407 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 PRAMEF14Q5SWL7 426 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 ARTNQ5T4W7 220 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TTC39BQ5VTQ0 682 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TAF3Q5VWG9 929 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 GLRX5Q86SX6 157 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 NOP9Q86U38 636 aaKnown RBP13.74□□□□□ -0.21
CPSF6-204ENST00000547486 ZNF683Q8IZ20 524 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TMEM35BQ8NCS4 154 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 BAHD1Q8TBE0 780 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-204ENST00000547486 SLC6A18Q96N87 628 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 OMDQ99983 421 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 SIK2Q9H0K1 926 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 TMPRSS4Q9NRS4 437 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 ARHGEF38Q9NXL2 777 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPSF6-204ENST00000547486 SARDHQ9UL12 918 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 PCDHGB2Q9Y5G2 931 aa13.74□□□□□ -0.21
CPSF6-204ENST00000547486 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.73□□□□□ -0.21
CPSF6-204ENST00000547486 IL1BP01584 269 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 WNT1P04628 370 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 C5AR1P21730 350 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 DRD3P35462 400 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 CTSKP43235 329 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 SNX16P57768 344 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 SULT2A1Q06520 285 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 ZNF177Q13360 481 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms