RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SCYL1Q96KG9 808 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 ACBD6Q9BR61 282 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 SPON2Q9BUD6 331 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 FSD1LQ9BXM9 530 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 NT5MQ9NPB1 228 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 NUMBLQ9Y6R0 609 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 BPTFQ12830 3046 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 DCLK1O15075 740 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 GJB3O75712 270 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 CNTN5O94779 1100 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 VAPBO95292 243 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 NMBRP28336 390 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 RPL9P32969 192 aaKnown RBP13.01□□□□□ -0.33
SCAF11-209ENST00000547018 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 SLC2A13Q96QE2 648 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 PCDHA11Q9Y5I1 949 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 ACTL7BQ9Y614 415 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 ACTL7AQ9Y615 435 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
SCAF11-209ENST00000547018 HMX2A2RU54 273 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 TBKBP1A7MCY6 615 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 RFPL1O75677 317 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CD68P34810 354 aaPredicted RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 SEMA5AQ13591 1074 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 DPYSQ14117 519 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 PARP6Q2NL67 630 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 RFWD3Q6PCD5 774 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 KCTD13Q8WZ19 329 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 FBXO32Q969P5 355 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 OXNAD1Q96HP4 312 aaPredicted RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 EXOC2Q96KP1 924 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 OLFM3Q96PB7 478 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SLC39A8Q9C0K1 460 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CCDC134Q9H6E4 229 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SLC12A8A0AV02 714 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SPATA31D3P0C874 917 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CCNB1P14635 433 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CCR1P32246 355 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 FDFT1P37268 417 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 GARSP41250 739 aaKnown RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 MGAT3Q09327 533 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 VWA5B1Q5TIE3 1220 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 ZNF280DQ6N043 979 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SPATA31D4Q6ZUB0 917 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SLC24A5Q71RS6 500 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 YTHDF3Q7Z739 585 aaKnown RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 CNTD1Q8N815 330 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 MZB1Q8WU39 189 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 RXFP1Q9HBX9 757 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CREBZFQ9NS37 354 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 TSR3Q9UJK0 312 aaKnown RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 TRIM17Q9Y577 477 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 PRKCGP05129 697 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 ENO1P06733 434 aaKnown RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 AQP5P55064 265 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 ELF3P78545 371 aaPredicted RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 IRF9Q00978 393 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 TAF10Q12962 218 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 XRCC4Q13426 336 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SNCBQ16143 134 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 TAF12Q16514 161 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 DCLRE1AQ6PJP8 1040 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CD300LGQ6UXG3 332 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 PACS1Q6VY07 963 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 CCDC91Q7Z6B0 441 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SCD5Q86SK9 330 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 PSTKQ8IV42 348 aaKnown RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 GPATCH11Q8N954 259 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 ANKLE1Q8NAG6 615 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 RPRD1AQ96P16 312 aaPredicted RBP13□□□□□ -0.33
SCAF11-209ENST00000547018 DEFB118Q96PH6 123 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 FTHL17Q9BXU8 183 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SLC2A6Q9UGQ3 507 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SRRDQ9UH36 339 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
SCAF11-209ENST00000547018 SRRM3A6NNA2 597 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 ITGA9Q13797 1035 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 FASTKD1Q53R41 847 aaKnown RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 FAM219BQ5XKK7 198 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 KIAA1841Q6NSI8 718 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 C4orf50Q6ZRC1 276 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 TAS1R1Q7RTX1 841 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 DENND6AQ8IWF6 608 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 CERS2Q96G23 380 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 MLPHQ9BV36 600 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 C20orf27Q9GZN8 174 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 PCDHB7Q9Y5E2 793 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 A0A1W2PQ45 241 aaPredicted RBP12.99□□□□□ -0.33
SCAF11-209ENST00000547018 A0A1W2PQY0 241 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 J3KR12 359 aa12.99□□□□□ -0.33
SCAF11-209ENST00000547018 NEMP1O14524 444 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms