RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ATP5C1P36542 298 aaKnown RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 FLT3P36888 993 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 YWHAZP63104 245 aaKnown RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 SLC7A9P82251 487 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 EFEMP1Q12805 493 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF268Q14587 947 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF77Q15935 545 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 CCDC122Q5T0U0 273 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 OTUD1Q5VV17 481 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 PARM1Q6UWI2 310 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 PHLDB2Q86SQ0 1253 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 TAC4Q86UU9 113 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 DDX42Q86XP3 938 aaKnown RBP eCLIP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 DNAAF5Q86Y56 855 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 MIB1Q86YT6 1006 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 TMTC1Q8IUR5 882 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ARID3BQ8IVW6 561 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ZDHHC14Q8IZN3 488 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF276Q8N554 614 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 EMC1Q8N766 993 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 SH3RF2Q8TEC5 729 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 CTNNBL1Q8WYA6 563 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 FGF14Q92915 247 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 USP13Q92995 863 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 RSPRY1Q96DX4 576 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 VCPIP1Q96JH7 1222 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 PDLIM2Q96JY6 352 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 SERPINB11Q96P15 392 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 MCEEQ96PE7 176 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 KXD1Q9BQD3 176 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 SELENOOQ9BVL4 669 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 PACSIN1Q9BY11 444 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 THAP2Q9H0W7 228 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ISCUQ9H1K1 167 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ACSS3Q9H6R3 686 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 FAM204AQ9H8W3 233 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 TRPV4Q9HBA0 871 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 TDP1Q9NUW8 608 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 MARCH2Q9P0N8 246 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 CNOT8Q9UFF9 292 aaKnown RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 GPN3Q9UHW5 284 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 STAP1Q9ULZ2 295 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 NAALADL1Q9UQQ1 740 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 CCL26Q9Y258 94 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 NUMBLQ9Y6R0 609 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 SCINQ9Y6U3 715 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 DOCK4Q8N1I0 1966 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ANKRD62A6NC57 917 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 C2CD4BA6NLJ0 364 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 HEPACAM2A8MVW5 462 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ANHXE9PGG2 379 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ZNF263O14978 683 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 NRDCO43847 1150 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ECI2O75521 394 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 NDUFA10O95299 355 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 MED26O95402 600 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 GJB6O95452 261 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 IGLV3-25P01717 112 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 PTMAP06454 111 aaKnown RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 IRF1P10914 325 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 KRT3P12035 628 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 TCF3P15923 654 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 SDC4P31431 198 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 VIPR2P41587 438 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 MATKP42679 507 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 SULT1E1P49888 294 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 RNASE9P60153 205 aaKnown RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 PITX1P78337 314 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ZXDBP98169 803 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 MAMLD1Q13495 774 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 MAP7Q14244 749 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 MTF1Q14872 753 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 SPA17Q15506 151 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 DCAF6Q58WW2 860 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 SYPL2Q5VXT5 272 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 PLEKHA7Q6IQ23 1121 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 TRNP1Q6NT89 227 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 DCUN1D2Q6PH85 259 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 VITQ6UXI7 678 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 RAD9BQ6WBX8 426 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ARCQ7LC44 396 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 DEFB106AQ8N104 65 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 CELF5Q8N6W0 485 aaKnown RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 JOSD2Q8TAC2 188 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 DEPDC1BQ8WUY9 529 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 E2F7Q96AV8 911 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ELSPBP1Q96BH3 223 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ARHGEF26Q96DR7 871 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 FRMD6Q96NE9 622 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 NECAB3Q96P71 396 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 CYP2S1Q96SQ9 504 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 RNF38Q9H0F5 515 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 SEMA6CQ9H3T2 930 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 ZFP14Q9HCL3 533 aa6.58□□□□□ -1.36
PRKDC-211ENST00000546304 LUC7LQ9NQ29 371 aaKnown RBP6.58□□□□□ -1.36
PRKDC-211ENST00000546304 PARVAQ9NVD7 372 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms