RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CDH16O75309 829 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 GCAP28676 217 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 CD68P34810 354 aaPredicted RBP20.32■□□□□ 0.84
COPS7A-218ENST00000543939 PPP3CCP48454 512 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 LMAN1P49257 510 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 ATP1A2P50993 1020 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 PPP2R2AP63151 447 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 SARNPP82979 210 aaKnown RBP20.32■□□□□ 0.84
COPS7A-218ENST00000543939 ALFQ53S48 1182 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 C3orf62Q6ZUJ4 267 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 UMODL1-AS1Q8N2C9 162 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 ARFGAP2Q8N6H7 521 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 PHOSPHO2Q8TCD6 241 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 IGSF8Q969P0 613 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 PSMG2Q969U7 264 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 LRRC39Q96DD0 335 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 GORASP1Q9BQQ3 440 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 CTNNAL1Q9UBT7 734 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 RABGEF1Q9UJ41 708 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 SLC4A7Q9Y6M7 1214 aa20.32■□□□□ 0.84
COPS7A-218ENST00000543939 CNTN5O94779 1100 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 MLNP12872 115 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 GRIA1P42261 906 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 TDRPQ86YL5 185 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 LRRC49Q8IUZ0 686 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 RIBC1Q8N443 379 aaPredicted RBP20.31■□□□□ 0.84
COPS7A-218ENST00000543939 SIGLEC10Q96LC7 697 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 TEKT5Q96M29 485 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 NACA2Q9H009 215 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 GBA3Q9H227 469 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 PPCSQ9HAB8 311 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 PRDM10Q9NQV6 1147 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 DONSONQ9NYP3 566 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.31■□□□□ 0.84
COPS7A-218ENST00000543939 UXTQ9UBK9 157 aaPredicted RBP20.31■□□□□ 0.84
COPS7A-218ENST00000543939 ZNF212Q9UDV6 495 aa20.31■□□□□ 0.84
COPS7A-218ENST00000543939 TGM5O43548 720 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 CXCL14O95715 111 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 OAS1P00973 400 aaKnown RBP20.3■□□□□ 0.84
COPS7A-218ENST00000543939 JCHAINP01591 159 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 ATP2A2P16615 1042 aaKnown RBP20.3■□□□□ 0.84
COPS7A-218ENST00000543939 NDST2P52849 883 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 ITPRIPL1Q6GPH6 555 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 TMEM150AQ86TG1 271 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 CHSY1Q86X52 802 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 FBF1Q8TES7 1133 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 AGAP3Q96P47 875 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 ACSS3Q9H6R3 686 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 FETUBQ9UGM5 382 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 RSPH14Q9UHP6 348 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 DENND4CQ5VZ89 1909 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 GOLGA6L7A0A1B0GV03 622 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 LCHNA4D1U4 455 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 MATN3O15232 486 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 ACSL4O60488 711 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 SHOX2O60902 331 aaPredicted RBP20.3■□□□□ 0.84
COPS7A-218ENST00000543939 SPAG6O75602 509 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 SPATA31D3P0C874 917 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 TACR2P21452 398 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 PAPOLAP51003 745 aaKnown RBP20.3■□□□□ 0.84
COPS7A-218ENST00000543939 C5orf22Q49AR2 442 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 LRRC8BQ6P9F7 803 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 LILRA6Q6PI73 481 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 SPATA31D4Q6ZUB0 917 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 TFAP2DQ7Z6R9 452 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 ITIH5Q86UX2 942 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 CNTD1Q8N815 330 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 PLD4Q96BZ4 506 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 IL12RB2Q99665 862 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 CAPS2Q9BXY5 557 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 RNF38Q9H0F5 515 aa20.3■□□□□ 0.84
COPS7A-218ENST00000543939 ZNF334Q9HCZ1 680 aaPredicted RBP20.3■□□□□ 0.84
COPS7A-218ENST00000543939 C2orf78A6NCI8 922 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 TLL1O43897 1013 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 F11P03951 625 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 CCNB1P14635 433 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 SYN1P17600 705 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 NFKB1P19838 968 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 ATP5DP30049 168 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 CA8P35219 290 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 BMPR1AP36894 532 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 MMP13P45452 471 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 RASA2Q15283 850 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 TIGD7Q6NT04 549 aaPredicted RBP20.29■□□□□ 0.84
COPS7A-218ENST00000543939 TMC7Q7Z402 723 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 CYP4X1Q8N118 509 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 AZIN2Q96A70 460 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 MYEOVQ96EZ4 313 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 RPRD1AQ96P16 312 aaPredicted RBP20.29■□□□□ 0.84
COPS7A-218ENST00000543939 KLHL5Q96PQ7 755 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 SLC24A2Q9UI40 661 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 LZTS1Q9Y250 596 aa20.29■□□□□ 0.84
COPS7A-218ENST00000543939 MTCL1Q9Y4B5 1905 aaKnown RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 POC1B-GALNT4F8VUJ3 575 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 CACNG3O60359 315 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 STC2O76061 302 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 SUN1O94901 812 aa20.28■□□□□ 0.84
COPS7A-218ENST00000543939 HARS2P49590 506 aaKnown RBP20.28■□□□□ 0.84
COPS7A-218ENST00000543939 KLHL38Q2WGJ6 581 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms