RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 STK19P49842 368 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BNC1Q01954 994 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PTP4A2Q12974 167 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SEMA3BQ13214 749 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MTA1Q13330 715 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BRMS1LQ5PSV4 323 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RABGAP1LQ5R372 815 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FKBP15Q5T1M5 1219 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SYCP2LQ5T4T6 812 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FAM102AQ5T9C2 384 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SH3PXD2AQ5TCZ1 1133 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NAA35Q5VZE5 725 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RABEPKQ7Z6M1 372 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FAM124AQ86V42 546 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DHX40Q8IX18 779 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RGL4Q8IZJ4 473 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 OR2I1PQ8NGU4 316 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FRS2Q8WU20 508 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PTPRN2Q92932 1015 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RNF34Q969K3 372 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RPL10LQ96L21 214 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 C1orf74Q96LT6 269 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ERGIC2Q96RQ1 377 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ORAI3Q9BRQ5 295 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FEM1AQ9BSK4 669 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PCED1AQ9H1Q7 454 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PDCL3Q9H2J4 239 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 WDCPQ9H6R7 721 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NLRC4Q9NPP4 1024 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TMPRSS4Q9NRS4 437 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DAAM1Q9Y4D1 1078 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SNX10Q9Y5X0 201 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DMXL2Q8TDJ6 3036 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CHD6Q8TD26 2715 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CACNA1BQ00975 2339 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 IGLV3-10A0A075B6K4 115 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 EDDM13A0A1B0GTR0 161 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DRGXA6NNA5 263 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NUMBP49757 651 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SULT1E1P49888 294 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ST8SIA6P61647 398 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TYRO3Q06418 890 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 UAP1L1Q3KQV9 507 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RAB6CQ53S08 254 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ALFQ53S48 1182 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZNF776Q68DI1 518 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PSAPL1Q6NUJ1 521 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CCDC117Q8IWD4 279 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RPRD1AQ96P16 312 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SIK2Q9H0K1 926 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RAB6CQ9H0N0 254 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PABPC3Q9H361 631 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DNAAF2Q9NVR5 837 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZNF212Q9UDV6 495 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SERGEFQ9UGK8 458 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SUSD2Q9UGT4 822 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 STAP1Q9ULZ2 295 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 WASF3Q9UPY6 502 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZFHX4Q86UP3 3567 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FREM2Q5SZK8 3169 aa13.5□□□□□ -0.25
TNFRSF1A-215ENST00000543359 A0A1B0GTW7 788 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GOLGA8SH3BPF8 625 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CLDN11O75508 207 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MOCS3O95396 460 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SEMA4FO95754 770 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 F9P00740 461 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DNTTP04053 509 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CEACAM1P13688 526 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CD59P13987 128 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 VAV1P15498 845 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 STAT1P42224 750 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NOVA1P51513 510 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CDH4P55283 916 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 UBXN1Q04323 297 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DEUP1Q05D60 604 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SULT2A1Q06520 285 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CST6Q15828 149 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 USP30Q70CQ3 517 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZCCHC9Q8N567 271 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MINDY1Q8N5J2 469 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SLC30A5Q8TAD4 765 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GTPBP2Q9BX10 602 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BTBD1Q9H0C5 482 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SGK2Q9HBY8 427 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ADAMTS1Q9UHI8 967 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 EIF2B4Q9UI10 523 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SCML1Q9UN30 329 aa13.49□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MEI4A8MW99 385 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MID1O15344 667 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BCAT2O15382 392 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TEX33O43247 280 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ATP9BO43861 1147 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TPM2P07951 284 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms