RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
CHFR-221ENST00000542714 ZSCAN18Q8TBC5 510 aaPredicted RBP13.61□□□□□ -0.23
CHFR-221ENST00000542714 ING5Q8WYH8 240 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 CPT1BQ92523 772 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 ZSWIM3Q96MP5 696 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 TSGA13Q96PP4 275 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 TXLNGYQ9BZA5 131 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 BRD8Q9H0E9 1235 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 SFXN1Q9H9B4 322 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 PAK5Q9P286 719 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 ANAPC5Q9UJX4 755 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 TPX2Q9ULW0 747 aaKnown RBP13.61□□□□□ -0.23
CHFR-221ENST00000542714 CCL26Q9Y258 94 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
CHFR-221ENST00000542714 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
CHFR-221ENST00000542714 DENND4AQ7Z401 1863 aa13.61□□□□□ -0.23
CHFR-221ENST00000542714 A0A0A0MRY4 1105 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 TCRBV7S3A2A0A539 114 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 RASA4BC9J798 803 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 LEFTY2O00292 366 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 RASA4O43374 803 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 TSPAN3O60637 253 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 SASH3O75995 380 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 PTPN3P26045 913 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 CHKAP35790 457 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 HSPA9P38646 679 aaKnown RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 MAPKAPK2P49137 400 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 PAPOLAP51003 745 aaKnown RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 NDST2P52849 883 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 ZBTB17Q13105 803 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 TMEM184AQ6ZMB5 413 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 MREGQ8N565 214 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 TSEN2Q8NCE0 465 aaKnown RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 BBOF1Q8ND07 529 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 CCNYQ8ND76 341 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 OR52K2Q8NGK3 314 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 SH3RF2Q8TEC5 729 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 PRCCQ92733 491 aaPredicted RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 USP13Q92995 863 aaPredicted RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 LRRC45Q96CN5 670 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 HMCESQ96FZ2 354 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 PWWP2AQ96N64 755 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 SPATA13Q96N96 652 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 FMO2Q99518 471 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 CEP41Q9BYV8 373 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 NSUN3Q9H649 340 aaKnown RBP13.6□□□□□ -0.23
CHFR-221ENST00000542714 IGFLR1Q9H665 355 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 DZANK1Q9NVP4 752 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 SEPT10Q9P0V9 454 aa13.6□□□□□ -0.23
CHFR-221ENST00000542714 LAMA2P24043 3122 aaKnown RBP13.59□□□□□ -0.23
CHFR-221ENST00000542714 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
CHFR-221ENST00000542714 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 KCNK1O00180 336 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 MAFKO60675 156 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 TMEM63AO94886 807 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 METTL18O95568 372 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 TNNT3P45378 269 aaPredicted RBP13.59□□□□□ -0.23
CHFR-221ENST00000542714 CDH4P55283 916 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 CAV1Q03135 178 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 GAD2Q05329 585 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 USP4Q13107 963 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 KCNJ11Q14654 390 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 RABGAP1LQ5R372 815 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ANKRD20A2Q5SQ80 823 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ANKRD20A1Q5TYW2 823 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ANKRD20A3Q5VUR7 823 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 TMC3Q7Z5M5 1100 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 BBS7Q8IWZ6 715 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ZNF567Q8N184 647 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 CPXM2Q8N436 756 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ATPAF2Q8N5M1 289 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 EFHBQ8N7U6 833 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 NAT8LQ8N9F0 302 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ZNF419Q96HQ0 510 aaPredicted RBP13.59□□□□□ -0.23
CHFR-221ENST00000542714 DDX50Q9BQ39 737 aaKnown RBP13.59□□□□□ -0.23
CHFR-221ENST00000542714 GORASP1Q9BQQ3 440 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 ZNF576Q9H609 170 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 RETREG1Q9H6L5 497 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 LSM7Q9UK45 103 aaKnown RBP13.59□□□□□ -0.23
CHFR-221ENST00000542714 SHOC2Q9UQ13 582 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
CHFR-221ENST00000542714 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.23
CHFR-221ENST00000542714 ZNF197O14709 1029 aa13.58□□□□□ -0.24
CHFR-221ENST00000542714 MAP2K7O14733 419 aa13.58□□□□□ -0.24
CHFR-221ENST00000542714 OPHN1O60890 802 aa13.58□□□□□ -0.24
CHFR-221ENST00000542714 PPFIA2O75334 1257 aa13.58□□□□□ -0.24
CHFR-221ENST00000542714 ZNF189O75820 626 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms