RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 NUMBP49757 651 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 AFF3P51826 1226 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 METAP1P53582 386 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 CENPCQ03188 943 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 SLC12A1Q13621 1099 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 HNRNPDQ14103 355 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 DRAP1Q14919 205 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 HSP90AA4PQ58FG1 418 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 KIAA0895LQ68EN5 471 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 OR6B2Q6IFH4 312 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 TRNP1Q6NT89 227 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 LAYNQ6UX15 382 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 BNIPLQ7Z465 357 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 MMAAQ8IVH4 418 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 FEM1AQ9BSK4 669 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 TM7SF3Q9NS93 570 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 PIGVQ9NUD9 493 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 ARHGEF38Q9NXL2 777 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 SCML1Q9UN30 329 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 ANKRD6Q9Y2G4 727 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 TBC1D30Q9Y2I9 924 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 FHOD1Q9Y613 1164 aa12.18□□□□□ -0.46
CLSTN3-211ENST00000541667 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 EDDM13A0A1B0GTR0 161 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 A0A1W2PP55 124 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 A0A1W2PPC4 97 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 F5H5T6 163 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 PAGE1O75459 146 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 DAB1O75553 588 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 CNTN5O94779 1100 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 FSBPO95073 299 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 ADCY5O95622 1261 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 WNT1P04628 370 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 SLC2A3P11169 496 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 DRD3P35462 400 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 KRT9P35527 623 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 GGCXP38435 758 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 MATKP42679 507 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 CTSKP43235 329 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 GRIA4P48058 902 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 ST8SIA6P61647 398 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 NCEH1Q6PIU2 408 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 ADAMTS14Q8WXS8 1223 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 PGAP3Q96FM1 320 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 FAM204AQ9H8W3 233 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 TMPRSS4Q9NRS4 437 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 SARDHQ9UL12 918 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 ZMIZ1Q9ULJ6 1067 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 VANGL2Q9ULK5 521 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 BTBD3Q9Y2F9 522 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 SNX10Q9Y5X0 201 aa12.17□□□□□ -0.46
CLSTN3-211ENST00000541667 DOCK9Q9BZ29 2069 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 A0A1B0GVM2 712 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 A0A1W2PR77 199 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TCAF2A6NFQ2 919 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 DRGXA6NNA5 263 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 H0Y8X5 98 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 M0QYT0 321 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 RNF103O00237 685 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TAF4O00268 1085 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ATP9BO43861 1147 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TRIM16O95361 564 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 MT-CO1P00395 513 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 FTH1P19P0C7X4 201 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 UCHL3P15374 230 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 GOT1P17174 413 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ABCB4P21439 1286 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 BPIFB4P59827 614 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 NME3Q13232 169 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 SHBQ15464 509 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ZNF423Q2M1K9 1284 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TTC31Q49AM3 519 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ALFQ53S48 1182 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 C2CD6Q53TS8 623 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TCP11X2Q5H9J9 407 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 CT47A1Q5JQC4 288 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 NOP9Q86U38 636 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 XYLT1Q86Y38 959 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ZDHHC17Q8IUH5 632 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 SNX19Q92543 992 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 PSMB7Q99436 277 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 ZNF212Q9UDV6 495 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TMEM59LQ9UK28 342 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 PPM1HQ9ULR3 514 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 FZD4Q9ULV1 537 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 NCKAP1Q9Y2A7 1128 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 TMEM131Q92545 1883 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 FREM2Q5SZK8 3169 aa12.16□□□□□ -0.46
CLSTN3-211ENST00000541667 LAMA5O15230 3695 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 PLXNA2O75051 1894 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 PLK4O00444 970 aa12.15□□□□□ -0.46
CLSTN3-211ENST00000541667 VILLO15195 856 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms