RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 P2RY11Q96G91 374 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 FUBP3Q96I24 572 aaKnown RBP eCLIP10.42□□□□□ -0.74
LMO3-224ENST00000540848 SIGLEC10Q96LC7 697 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 HAPLN3Q96S86 360 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 PITPNM3Q9BZ71 974 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 DONSONQ9NYP3 566 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.42□□□□□ -0.74
LMO3-224ENST00000540848 FNIP2Q9P278 1114 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 FRMPD3Q5JV73 1810 aa10.42□□□□□ -0.74
LMO3-224ENST00000540848 SYN3O14994 580 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 FGF10O15520 208 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 SPAG7O75391 227 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 DNAJC8O75937 253 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 ALDH1A2O94788 518 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 IL1BP01584 269 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 C1QAP02745 245 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 CKBP12277 381 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 VAV1P15498 845 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 ERCC2P18074 760 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 ALDH3A1P30838 453 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 RPA3P35244 121 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 LIG3P49916 1009 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 AFF1P51825 1210 aaKnown RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 PRMT2P55345 433 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 YWHAHQ04917 246 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 DSC1Q08554 894 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 AP1B1Q10567 949 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 IFRD2Q12894 506 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 MTA1Q13330 715 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 SPDYAQ5MJ70 313 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 ACBD5Q5T8D3 534 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 BSPRYQ5W0U4 402 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 CD300LGQ6UXG3 332 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 UNC5AQ6ZN44 842 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 HFE2Q6ZVN8 426 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 ZNF534Q76KX8 674 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 BHLHA9Q7RTU4 235 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 SPATA2LQ8IUW3 424 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 LRRC49Q8IUZ0 686 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 C4orf33Q8N1A6 199 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 ARHGAP18Q8N392 663 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 MICALL1Q8N3F8 863 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 TAB3Q8N5C8 712 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 RNF169Q8NCN4 708 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 CCNYQ8ND76 341 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 STAMBPL1Q96FJ0 436 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 KCNK16Q96T55 309 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 OSBPL7Q9BZF2 842 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.41□□□□□ -0.74
LMO3-224ENST00000540848 PRDM12Q9H4Q4 367 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 ELAC1Q9H777 363 aaKnown RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 PRKAG3Q9UGI9 489 aa10.41□□□□□ -0.74
LMO3-224ENST00000540848 TIMM13Q9Y5L4 95 aaPredicted RBP10.41□□□□□ -0.74
LMO3-224ENST00000540848 SYNJ2BP-COX16A0A087WUM0 186 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 A0A1W2PPM1 405 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 MAGEB16A2A368 324 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 CFAP73A6NFT4 308 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 LPXNO60711 386 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 OAZ2O95190 189 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 IGLV3-25P01717 112 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 CELA2BP08218 269 aaPredicted RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 PGAM1P18669 254 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 BDNFP23560 247 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 CCNFP41002 786 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 SKIV2L2P42285 1042 aaKnown RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 NEK3P51956 506 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 NRLP54845 237 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 NRG1Q02297 640 aaPredicted RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 GALNT2Q10471 571 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 WASHC5Q12768 1159 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 SMARCB1Q12824 385 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 PPP2R5DQ14738 602 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 EFTUD2Q15029 972 aaKnown RBP eCLIP10.4□□□□□ -0.74
LMO3-224ENST00000540848 TTC31Q49AM3 519 aaPredicted RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 NOMO2Q5JPE7 1267 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 FYB2Q5VWT5 728 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 LVRNQ6Q4G3 990 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 TIFABQ6ZNK6 161 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 DENND5BQ6ZUT9 1274 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 CTAGE3PQ8IX95 158 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 PPM1NQ8N819 430 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 RAB3IL1Q8TBN0 382 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 ACMSDQ8TDX5 336 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 NDRG1Q92597 394 aaKnown RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 ZIC5Q96T25 663 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 LGMNQ99538 433 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 PAIP2Q9BPZ3 127 aaKnown RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 PAAF1Q9BRP4 392 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 OXCT2Q9BYC2 517 aaPredicted RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 IQCGQ9H095 443 aaKnown RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 SMOC2Q9H3U7 446 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 TRMT13Q9NUP7 481 aaKnown RBP10.4□□□□□ -0.74
LMO3-224ENST00000540848 RNF186Q9NXI6 227 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 ARHGEF38Q9NXL2 777 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 MOCS1Q9NZB8 636 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 COX16Q9P0S2 106 aa10.4□□□□□ -0.74
LMO3-224ENST00000540848 OR12D3Q9UGF7 316 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms