RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CFAP52Q8N1V2 620 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 WDTC1Q8N5D0 677 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 FRMD1Q8N878 549 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 OR2T34Q8NGX1 318 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 OR8D1Q8WZ84 308 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SNX19Q92543 992 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 HAPLN3Q96S86 360 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 NPY6RQ99463 290 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 CDC6Q99741 560 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 NAA15Q9BXJ9 866 aaKnown RBP10.7□□□□□ -0.7
CDCA3-208ENST00000540683 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 VPS16Q9H269 839 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 PABPC3Q9H361 631 aaKnown RBP10.7□□□□□ -0.7
CDCA3-208ENST00000540683 RXFP3Q9NSD7 469 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 FBXL12Q9NXK8 326 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 COX16Q9P0S2 106 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 ADAMTS1Q9UHI8 967 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 VPS28Q9UK41 221 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 PCDHGB2Q9Y5G2 931 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 FHOD1Q9Y613 1164 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 GON4LQ3T8J9 2241 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SPTBN2O15020 2390 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 CACNA1EQ15878 2313 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 TMEM8BA6NDV4 472 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ANTXRLA6NF34 631 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 FLRT2O43155 660 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 GRAP2O75791 330 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 CALCAP01258 141 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ERBB2P04626 1255 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 CALB1P05937 261 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 HLA-EP13747 358 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ZNF18P17022 549 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 GOT1P17174 413 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 PMLP29590 882 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 SDC4P31431 198 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 RECQLP46063 649 aaPredicted RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 SGSHP51688 502 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 C21orf59P57076 290 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 RNASE9P60153 205 aaKnown RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 TPM4P67936 248 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 KRT31Q15323 416 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 CST6Q15828 149 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 C5orf22Q49AR2 442 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ACCSLQ4AC99 568 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 PTPN20Q4JDL3 420 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 HSP90AA4PQ58FG1 418 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 N4BP2L1Q5TBK1 243 aaPredicted RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 FBXL22Q6P050 247 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 FAM124AQ86V42 546 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ZSCAN30Q86W11 494 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 OXR1Q8N573 874 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 DEFB119Q8N690 84 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 EPS8L1Q8TE68 723 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 NT5C3BQ969T7 300 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 PPP1R16AQ96I34 528 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 LMLNQ96KR4 655 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 PRMT1Q99873 361 aaKnown RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ACE2Q9BYF1 805 aaPredicted RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 TKTL2Q9H0I9 626 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ACP6Q9NPH0 428 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 DYRK4Q9NR20 520 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 SAMSN1Q9NSI8 373 aaKnown RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ARHGEF38Q9NXL2 777 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 TAB2Q9NYJ8 693 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 LIMA1Q9UHB6 759 aaKnown RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 VANGL2Q9ULK5 521 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 HPCAL4Q9UM19 191 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 MYO6Q9UM54 1294 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 APOBEC2Q9Y235 224 aaKnown RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D30Q9Y2I9 924 aa10.69□□□□□ -0.7
CDCA3-208ENST00000540683 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.69□□□□□ -0.7
CDCA3-208ENST00000540683 LRRC10BA6NIK2 292 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 LGALS16A8MUM7 142 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 ATP9BO43861 1147 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 SIN3BO75182 1162 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 PAGE1O75459 146 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 RNASEH2AO75792 299 aaKnown RBP10.68□□□□□ -0.7
CDCA3-208ENST00000540683 FSBPO95073 299 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 RHOCP08134 193 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 CDK4P11802 303 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 PDGFRAP16234 1089 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 SLC8A1P32418 973 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 CCR5P51681 352 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 AIF1P55008 147 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 POLR2FP61218 127 aaKnown RBP10.68□□□□□ -0.7
CDCA3-208ENST00000540683 RACK1P63244 317 aaKnown RBP10.68□□□□□ -0.7
CDCA3-208ENST00000540683 UBXN1Q04323 297 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 KCNMA1Q12791 1236 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 OVGP1Q12889 678 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 GRIK2Q13002 908 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 TAF5Q15542 800 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 KIAA0895LQ68EN5 471 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 XYLT1Q86Y38 959 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 ZCCHC9Q8N567 271 aaKnown RBP10.68□□□□□ -0.7
CDCA3-208ENST00000540683 DCAF4L2Q8NA75 395 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 FAM174AQ8TBP5 190 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 WFDC5Q8TCV5 224 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 FEM1AQ9BSK4 669 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 SIK2Q9H0K1 926 aa10.68□□□□□ -0.7
CDCA3-208ENST00000540683 SLC6A17Q9H1V8 727 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms