RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 SF3A3Q12874 501 aaKnown RBP eCLIP15.21■□□□□ 0.03
TSFM-207ENST00000540550 PDK4Q16654 411 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 SLC39A5Q6ZMH5 540 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 CYS1Q717R9 158 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 ANKRD33Q7Z3H0 272 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 CRIPAKQ8N1N5 446 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 DNAAF3Q8N9W5 541 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 OR52K1Q8NGK4 314 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 TCP10LQ8TDR4 215 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 MTBPQ96DY7 904 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 SERAC1Q96JX3 654 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 SPATA17Q96L03 361 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 TEKT5Q96M29 485 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 TSGA13Q96PP4 275 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 SYBUQ9NX95 663 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 CLIC5Q9NZA1 410 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 BFARQ9NZS9 450 aa15.21■□□□□ 0.03
TSFM-207ENST00000540550 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.03
TSFM-207ENST00000540550 SNX3O60493 162 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 POLBP06746 335 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 CSH1P0DML2 217 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 CSH2P0DML3 217 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 PYGBP11216 843 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 CD68P34810 354 aaPredicted RBP15.21■□□□□ 0.02
TSFM-207ENST00000540550 RTL3Q8N8U3 475 aaKnown RBP15.21■□□□□ 0.02
TSFM-207ENST00000540550 ATP6V0D2Q8N8Y2 350 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 USP33Q8TEY7 942 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 GRAMD1AQ96CP6 724 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 C1orf74Q96LT6 269 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 GORASP1Q9BQQ3 440 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 IQCGQ9H095 443 aaKnown RBP15.21■□□□□ 0.02
TSFM-207ENST00000540550 LRRC40Q9H9A6 602 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 MOCS1Q9NZB8 636 aa15.21■□□□□ 0.02
TSFM-207ENST00000540550 NYNRINQ9P2P1 1898 aaKnown RBP15.21■□□□□ 0.02
TSFM-207ENST00000540550 FAM92AA1XBS5 289 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 ALDH1A2O94788 518 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 UPP2O95045 317 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 ALADP13716 330 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 ALDH7A1P49419 539 aaKnown RBP15.2■□□□□ 0.02
TSFM-207ENST00000540550 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 TAF10Q12962 218 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 NAB1Q13506 487 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 CRYMQ14894 314 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 SPANXN3Q5MJ09 141 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 C10orf120Q5SQS8 335 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 TIGD7Q6NT04 549 aaPredicted RBP15.2■□□□□ 0.02
TSFM-207ENST00000540550 PRSS55Q6UWB4 352 aaPredicted RBP15.2■□□□□ 0.02
TSFM-207ENST00000540550 RSPO2Q6UXX9 243 aaPredicted RBP15.2■□□□□ 0.02
TSFM-207ENST00000540550 RGS9BPQ6ZS82 235 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 SPATA21Q7Z572 469 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 TMEM173Q86WV6 379 aaPredicted RBP15.2■□□□□ 0.02
TSFM-207ENST00000540550 ARHGAP12Q8IWW6 846 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 TTC17Q96AE7 1141 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 SLC39A13Q96H72 371 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 MLPHQ9BV36 600 aaPredicted RBP15.2■□□□□ 0.02
TSFM-207ENST00000540550 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.2■□□□□ 0.02
TSFM-207ENST00000540550 VANGL2Q9ULK5 521 aa15.2■□□□□ 0.02
TSFM-207ENST00000540550 AP3B1O00203 1094 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 COPEO14579 308 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 TBC1D4O60343 1298 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 UGT1A9O60656 530 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 NEBLO76041 1014 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
TSFM-207ENST00000540550 CCNB1P14635 433 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 ADRA1DP25100 572 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 CNTFP26441 200 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
TSFM-207ENST00000540550 TLE2Q04725 743 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 DUSP4Q13115 394 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 TRIP4Q15650 581 aaPredicted RBP15.19■□□□□ 0.02
TSFM-207ENST00000540550 TRIM60Q495X7 471 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 PIK3R6Q5UE93 754 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 ARHGAP36Q6ZRI8 547 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 FAM47EQ6ZV65 393 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 MARK2Q7KZI7 788 aaKnown RBP15.19■□□□□ 0.02
TSFM-207ENST00000540550 TAS1R1Q7RTX1 841 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 C14orf80Q86SX3 495 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 RASSF3Q86WH2 238 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 BCL7CQ8WUZ0 217 aaPredicted RBP15.19■□□□□ 0.02
TSFM-207ENST00000540550 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 SLC39A8Q9C0K1 460 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 UGT1A7Q9HAW7 530 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 UGT1A10Q9HAW8 530 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 UGT1A8Q9HAW9 530 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 CASS4Q9NQ75 786 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 MPP6Q9NZW5 540 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 MARCH2Q9P0N8 246 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 FNIP2Q9P278 1114 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 GRID1Q9ULK0 1009 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 CDY1Q9Y6F8 540 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 DOCK4Q8N1I0 1966 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 USP12O75317 370 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 NEK3P51956 506 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 BMPR2Q13873 1038 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 IKBKEQ14164 716 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 KCTD11Q693B1 232 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 NAPEPLDQ6IQ20 393 aa15.19■□□□□ 0.02
TSFM-207ENST00000540550 LINC00523Q86TU6 105 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms