RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 TMEM51Q9NW97 253 aa17.24■□□□□ 0.35
PSMD3-204ENST00000540504 CHMP5Q9NZZ3 219 aa17.24■□□□□ 0.35
PSMD3-204ENST00000540504 DACH1Q9UI36 760 aa17.24■□□□□ 0.35
PSMD3-204ENST00000540504 SLCO1B1Q9Y6L6 691 aa17.24■□□□□ 0.35
PSMD3-204ENST00000540504 TMEM131Q92545 1883 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 FOXN3O00409 490 aaPredicted RBP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 PCDHGA12O60330 932 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 DAB1O75553 588 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 RNASEH2AO75792 299 aaKnown RBP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 GOT1P17174 413 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 ERCC5P28715 1186 aaPredicted RBP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 CLCN1P35523 988 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 SLC6A3Q01959 620 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 FBXL22Q6P050 247 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 SND1Q7KZF4 910 aaKnown RBP eCLIP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 FAM71AQ8IYT1 594 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 RHBDD1Q8TEB9 315 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 ZCCHC14Q8WYQ9 949 aaKnown RBP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 RPRD1AQ96P16 312 aaPredicted RBP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 ACE2Q9BYF1 805 aaPredicted RBP17.23■□□□□ 0.35
PSMD3-204ENST00000540504 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 SYNCQ9H7C4 482 aa17.23■□□□□ 0.35
PSMD3-204ENST00000540504 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 FAM47DPA6NHR8 397 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 C10orf142B7Z368 130 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 VILLO15195 856 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 GRAP2O75791 330 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 ERBB2P04626 1255 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 PDGFRAP16234 1089 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 MZF1P28698 734 aaPredicted RBP17.22■□□□□ 0.35
PSMD3-204ENST00000540504 CTSKP43235 329 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 CCT8P50990 548 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 CCR5P51681 352 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 AUHQ13825 339 aaKnown RBP17.22■□□□□ 0.35
PSMD3-204ENST00000540504 PTPN20Q4JDL3 420 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 VWA3BQ502W6 1294 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 CXorf57Q6NSI4 855 aaKnown RBP17.22■□□□□ 0.35
PSMD3-204ENST00000540504 NCEH1Q6PIU2 408 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 DSG4Q86SJ6 1040 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 SLC47A2Q86VL8 602 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 STK40Q8N2I9 435 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 SPAG5Q96R06 1193 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 TUBGCP2Q9BSJ2 902 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 CLSTN2Q9H4D0 955 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 SERGEFQ9UGK8 458 aa17.22■□□□□ 0.35
PSMD3-204ENST00000540504 PLXNA2O75051 1894 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 M0QYT0 321 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 CLDN11O75508 207 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 IL1BP01584 269 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 CDH5P33151 784 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 SCNN1AP37088 669 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 GRK6P43250 576 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 PSMD8P48556 350 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 STK19P49842 368 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 C21orf59P57076 290 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 NME3Q13232 169 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 ZNF177Q13360 481 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 INAVAQ3KP66 663 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 C5orf22Q49AR2 442 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 BRMS1LQ5PSV4 323 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 CIR1Q86X95 450 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 AADATQ8N5Z0 425 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 PNPLA1Q8N8W4 532 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 TMEM35BQ8NCS4 154 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 ALG14Q96F25 216 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 KDM4CQ9H3R0 1056 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 SLC25A13Q9UJS0 675 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 AJAP1Q9UKB5 411 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-204ENST00000540504 VANGL2Q9ULK5 521 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 STAP1Q9ULZ2 295 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 HS3ST4Q9Y661 456 aa17.21■□□□□ 0.35
PSMD3-204ENST00000540504 CFAP47Q6ZTR5 3102 aa17.21■□□□□ 0.34
PSMD3-204ENST00000540504 H0Y8X5 98 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 SLC7A4O43246 635 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 ATP9BO43861 1147 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 F9P00740 461 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 GABRB2P47870 512 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 ADPRHP54922 357 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 CDH4P55283 916 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 CT47A1Q5JQC4 288 aaPredicted RBP17.2■□□□□ 0.34
PSMD3-204ENST00000540504 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 FAM46CQ5VWP2 391 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 SLCO6A1Q86UG4 719 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 FRS2Q8WU20 508 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 FAM131CQ96AQ9 280 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 PGAP3Q96FM1 320 aaPredicted RBP17.2■□□□□ 0.34
PSMD3-204ENST00000540504 NPY6RQ99463 290 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 FEM1AQ9BSK4 669 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 PDCL3Q9H2J4 239 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
PSMD3-204ENST00000540504 TBC1D30Q9Y2I9 924 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 AKAP13Q12802 2813 aa17.2■□□□□ 0.34
PSMD3-204ENST00000540504 TP53BP1Q12888 1972 aaPredicted RBP17.19■□□□□ 0.34
PSMD3-204ENST00000540504 A0A1B0GTQ1 180 aa17.19■□□□□ 0.34
PSMD3-204ENST00000540504 SRRM3A6NNA2 597 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms