RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PIWIL2Q8TC59 973 aaKnown RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 ILKAPQ9H0C8 392 aaPredicted RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 TRIT1Q9H3H1 467 aaKnown RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 DCP1AQ9NPI6 582 aaPredicted RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 AQP9O43315 295 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 ZBED5Q49AG3 693 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 C4orf32Q8N8J7 132 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 ZNF398Q8TD17 642 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 RNF34Q969K3 372 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 KCTD14Q9BQ13 255 aaPredicted RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 RGS17Q9UGC6 210 aaPredicted RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 NUMBLQ9Y6R0 609 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 ARPC4-TTLL3A0A0A6YYG9 625 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 OR6C70A6NIJ9 312 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 MSH3P20585 1137 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 HADHAP40939 763 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RPL35P42766 123 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 TRIM72Q6ZMU5 477 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 FKBP9P1Q75LS8 142 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 ADCY4Q8NFM4 1077 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 ELMO2Q96JJ3 720 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 CDK5RAP1Q96SZ6 601 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 EMILIN2Q9BXX0 1053 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 KMT5AQ9NQR1 393 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 NOBOXO60393 691 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 ACOT2P49753 483 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 RBBP7Q16576 425 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 ASCC1Q8N9N2 400 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 TXLNGYQ9BZA5 131 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 FAM96AQ9H5X1 160 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 BTBD3Q9Y2F9 522 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 GTPBP10A4D1E9 387 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 H3BMQ9 156 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 LIASO43766 372 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 OPRL1P41146 370 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 ABCE1P61221 599 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 PSME3P61289 254 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 CCNA1P78396 465 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RORBQ92753 470 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 COG8Q96MW5 612 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 CCDC106Q9BWC9 280 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RNF103O00237 685 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 GH2P01242 217 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 UGT2B4P06133 528 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 NPR1P16066 1061 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 UQCRC1P31930 480 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RAB25P57735 213 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 E2F2Q14209 437 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 FASTKQ14296 549 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 ALX1Q15699 326 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 HDDC2Q7Z4H3 204 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RDM1Q8NG50 284 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 POF1BQ8WVV4 589 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 ATP13A3Q9H7F0 1226 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 SP140LQ9H930 580 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 FBXO40Q9UH90 709 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 SH3BP5O60239 455 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 PTPN1P18031 435 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 POLR2EP19388 210 aaKnown RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 CD247P20963 164 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 CDK8P49336 464 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 TOP3AQ13472 1001 aaPredicted RBP11.29□□□□□ -0.6
PBX1-212ENST00000540236 MOGQ16653 247 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 EMC1Q8N766 993 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 BANPQ8N9N5 519 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 TOR1AIP2Q8NFQ8 470 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 STARD7Q9NQZ5 370 aa11.29□□□□□ -0.6
PBX1-212ENST00000540236 TCRBV9S1A1TA0A576 114 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 IL7RP16871 459 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 CCR10P46092 362 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 KLF10Q13118 480 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 Q3C1V9 767 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 OMDQ99983 421 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 HGH1Q9BTY7 390 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 C14orf119Q9NWQ9 140 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 USP6P35125 1406 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 ERVK-10P10266 1014 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 BDNFP23560 247 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 USP10Q14694 798 aaKnown RBP11.28□□□□□ -0.6
PBX1-212ENST00000540236 TMEM198Q66K66 360 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 Q6ZNX1 250 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 ARMC8Q8IUR7 673 aa11.28□□□□□ -0.6
PBX1-212ENST00000540236 NARS2Q96I59 477 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms