RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MAIP1Q8WWC4 291 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CELF6Q96J87 481 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 RETREG1Q9H6L5 497 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NOL6Q9H6R4 1146 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 HPS4Q9NQG7 708 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 DTLQ9NZJ0 730 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 RAPGEFL1Q9UHV5 662 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CLEC4EQ9ULY5 219 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ZDBF2Q9HCK1 2354 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PRR33A8MZF0 331 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NEDD8-MDP1E9PL57 170 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 KRIT1O00522 736 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 LUC7L3O95232 432 aaKnown RBP19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 OR1E1P30953 314 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 GDI1P31150 447 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 MAPKAPK2P49137 400 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ZNF177Q13360 481 aaPredicted RBP19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ANO4Q32M45 955 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 RNF43Q68DV7 783 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ARHGAP12Q8IWW6 846 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 UMODL1-AS1Q8N2C9 162 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CARNMT1Q8N4J0 409 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CCDC33Q8N5R6 958 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 LZTR1Q8N653 840 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 OR52K2Q8NGK3 314 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 WFDC5Q8TCV5 224 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 C1orf54Q8WWF1 131 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ATG4AQ8WYN0 398 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 P3H4Q92791 437 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 EDAQ92838 391 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TRMT61BQ9BVS5 477 aaKnown RBP19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 BBS2Q9BXC9 721 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 MARK1Q9P0L2 795 aa19.42■□□□□ 0.7
TNFRSF1A-213ENST00000540022 OTOL1A6NHN0 477 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CHADO15335 359 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NFATC1O95644 943 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SERPINB6P35237 376 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CKAP4Q07065 602 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NOMO1Q15155 1222 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CXorf57Q6NSI4 855 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ZNF572Q7Z3I7 529 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TTC13Q8NBP0 860 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ATP2A3Q93084 1043 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 DONSONQ9NYP3 566 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TBC1D30Q9Y2I9 924 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 WDFY4Q6ZS81 3184 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 H0Y626 953 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TYRP14679 529 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NR2C2P49116 596 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ZXDAP98168 799 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 FSCBQ5H9T9 825 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 AFMIDQ63HM1 303 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 MFN1Q8IWA4 741 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SLC44A3Q8N4M1 653 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SPATA4Q8NEY3 305 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 OLFM3Q96PB7 478 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SLC39A8Q9C0K1 460 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 LRRC19Q9H756 370 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ECT2Q9H8V3 914 aa19.41■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ARNTLO00327 626 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ADH1CP00326 375 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ADH5P11766 374 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NDST2P52849 883 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 GAD2Q05329 585 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CDH18Q13634 790 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 RUNX3Q13761 415 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CCNG2Q16589 344 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 C6orf118Q5T5N4 469 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SETD3Q86TU7 594 aaPredicted RBP19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SLC35B2Q8TB61 432 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 LRRN4Q8WUT4 740 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CARD6Q9BX69 1037 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 RBM12Q9NTZ6 932 aaKnown RBP19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 GTSE1Q9NYZ3 720 aa19.4■□□□□ 0.7
TNFRSF1A-213ENST00000540022 A0A0D9SEW6 157 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RASA4BC9J798 803 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 HOXC11O43248 304 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RASA4O43374 803 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 LIASO43766 372 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NARSO43776 548 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RAMP2O60895 175 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 RHOCP08134 193 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 EIF3EP60228 445 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 SNX1Q13596 522 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 CYP1B1Q16678 543 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 GAB4Q2WGN9 574 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 B4GALNT4Q76KP1 1039 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ZC3H18Q86VM9 953 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 FIBINQ8TAL6 211 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 TTC8Q8TAM2 541 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NXPE3Q969Y0 559 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 BRD9Q9H8M2 597 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 IGSF9Q9P2J2 1179 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 DNPEPQ9ULA0 475 aa19.39■□□□□ 0.69
TNFRSF1A-213ENST00000540022 GOLGA6L10A0A0M3HER8 536 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 ILVBLA1L0T0 632 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 DFFAO00273 331 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 NUMBP49757 651 aa19.38■□□□□ 0.69
TNFRSF1A-213ENST00000540022 YBEYP58557 167 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 307.4 ms