RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ARID5BQ14865 1188 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 E2F5Q15329 346 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 ACBD5Q5T8D3 534 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 RNF219Q5W0B1 726 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 SCYL2Q6P3W7 929 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 TMC6Q7Z403 805 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 PYROXD2Q8N2H3 581 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 ARFGAP1Q8N6T3 406 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 OR8K1Q8NGG5 319 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 NTAN1Q96AB6 310 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 HINFPQ9BQA5 517 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 OSBPL2Q9H1P3 480 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 PRSS16Q9NQE7 514 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 MYO1AQ9UBC5 1043 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 NENFQ9UMX5 172 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 NEU3Q9UQ49 428 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 ABCA7Q8IZY2 2146 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 EP300Q09472 2414 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 DOCK4Q8N1I0 1966 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 FAM186AA6NE01 2351 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 TTC34A8MYJ7 566 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 RETP07949 1114 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 ADKP55263 362 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 NRG1Q02297 640 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 SCAPQ12770 1279 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 ARL13BQ3SXY8 428 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 KIAA1324Q6UXG2 1013 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 SLFN11Q7Z7L1 901 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 TMPRSS6Q8IU80 811 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 DRC7Q8IY82 874 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 PSMB7Q99436 277 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 THAP2Q9H0W7 228 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 PRDM16Q9HAZ2 1276 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 PARD6AQ9NPB6 346 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 GMEB2Q9UKD1 530 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 SPAG17Q6Q759 2223 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 SDK1Q7Z5N4 2213 aa18.81■□□□□ 0.6
SNRPA1-203ENST00000540017 PLXND1Q9Y4D7 1925 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 IGHV1OR15-9A0A0B4J2B8 117 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 A0A0D9SEW6 157 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 MFAP3LO75121 409 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 LRIG2O94898 1065 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 RHOCP08134 193 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 SRPRAP08240 638 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 MYBL1P10243 752 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 PSMA2P25787 234 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 OXCT1P55809 520 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 TBX2Q13207 712 aaPredicted RBP18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 PMS2CLQ68D20 193 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 ALKBH5Q6P6C2 394 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 VPS36Q86VN1 386 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 CACUL1Q86Y37 369 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 OR2T3Q8NH03 318 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 TRIM5Q9C035 493 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 ZYG11BQ9C0D3 744 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 PPARGC1AQ9UBK2 798 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 FZD10Q9ULW2 581 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 CYP8B1Q9UNU6 501 aa18.8■□□□□ 0.6
SNRPA1-203ENST00000540017 ZNF292O60281 2723 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 ZBTB24O43167 697 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 ST8SIA6P61647 398 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 GFPT1Q06210 699 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 SPEM2Q0P670 501 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 ASTE1Q2TB18 679 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 HNRNPA1L2Q32P51 320 aaKnown RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 SETD3Q86TU7 594 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 NLRP14Q86W24 1093 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 KIAA2013Q8IYS2 634 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 KDM1BQ8NB78 822 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 ARHGEF26Q96DR7 871 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 TRIM11Q96F44 468 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 SIPA1Q96FS4 1042 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 SPACA7Q96KW9 195 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 PEBP4Q96S96 227 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 CHP1Q99653 195 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 MUC3BQ9H195 1237 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 ARRDC1-AS1Q9H2J1 176 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 ABHD10Q9NUJ1 306 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 NDFIP2Q9NV92 336 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 GPATCH2LQ9NWQ4 482 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 USP36Q9P275 1121 aaKnown RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 SUN2Q9UH99 717 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 VPS28Q9UK41 221 aa18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 PTPRZ1P23471 2315 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-203ENST00000540017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 SNAP91O60641 907 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 SIN3BO75182 1162 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 ZNF217O75362 1048 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 EPN2O95208 641 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 C7P10643 843 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 VAV1P15498 845 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 OR1E1P30953 314 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 GALCP54803 685 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 ELF2Q15723 593 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 CCDC6Q16204 474 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 C9orf64Q5T6V5 341 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 DAB2IPQ5VWQ8 1189 aa18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 RWDD4Q6NW29 188 aaKnown RBP18.78■□□□□ 0.6
SNRPA1-203ENST00000540017 CYP4V2Q6ZWL3 525 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms