RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 KBTBD12Q3ZCT8 623 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 C16orf59Q7L2K0 433 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 TRABD2AQ86V40 505 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 NLRP14Q86W24 1093 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ANKRD42Q8N9B4 389 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 BCAS4Q8TDM0 211 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 IGSF8Q969P0 613 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 TEKT5Q96M29 485 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 TSGA13Q96PP4 275 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 DHRS4Q9BTZ2 278 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 EPN3Q9H201 632 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 INTS9Q9NV88 658 aaKnown RBP22.98■■□□□ 1.27
HOMER3-204ENST00000539827 BAIAP3O94812 1187 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 MLNP12872 115 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 MGAT1P26572 445 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ALDH1A3P47895 512 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 PAPOLAP51003 745 aaKnown RBP22.98■■□□□ 1.27
HOMER3-204ENST00000539827 CRADDP78560 199 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 PLD1Q13393 1074 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ALFQ53S48 1182 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 AFMIDQ63HM1 303 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ITPRIPL1Q6GPH6 555 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 FBXL22Q6P050 247 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ADGRD1Q6QNK2 874 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.98■■□□□ 1.27
HOMER3-204ENST00000539827 DCAKDQ8WVC6 231 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 CEP295NLQ96MC4 621 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 VAT1Q99536 393 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 MLPHQ9BV36 600 aaPredicted RBP22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ZYG11BQ9C0D3 744 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 FETUBQ9UGM5 382 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 ARHGAP42A6NI28 874 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 MAFKO60675 156 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 CSH1P0DML2 217 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 CSH2P0DML3 217 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 ATP5C1P36542 298 aaKnown RBP22.97■■□□□ 1.27
HOMER3-204ENST00000539827 RAB33AQ14088 237 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 OTOP3Q7RTS5 596 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 CNTD1Q8N815 330 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 ATXN2LQ8WWM7 1075 aaKnown RBP22.97■■□□□ 1.27
HOMER3-204ENST00000539827 CENPTQ96BT3 561 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 NOL6Q9H6R4 1146 aaKnown RBP22.97■■□□□ 1.27
HOMER3-204ENST00000539827 KIF9Q9HAQ2 790 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 DNMT3LQ9UJW3 386 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 KIAA1671Q9BY89 1806 aa22.97■■□□□ 1.27
HOMER3-204ENST00000539827 A0A1W2PPM1 405 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 ZNF840PA6NDX5 716 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 USP12O75317 370 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 CCNB1P14635 433 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 RHOQP17081 205 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 STX2P32856 288 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 CA8P35219 290 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 NR1H3Q13133 447 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 MPP2Q14168 576 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 RASA2Q15283 850 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 TAF12Q16514 161 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 ZSCAN26Q16670 478 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 NADSYN1Q6IA69 706 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 CASC4Q6P4E1 433 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 FOXR1Q6PIV2 292 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 CHSY1Q86X52 802 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 PDZD8Q8NEN9 1154 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 OR52K1Q8NGK4 314 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 STAMBPL1Q96FJ0 436 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 NACA2Q9H009 215 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 TRABDQ9H4I3 376 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 PPARGC1AQ9UBK2 798 aaKnown RBP22.96■■□□□ 1.27
HOMER3-204ENST00000539827 PCDHA11Q9Y5I1 949 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 NYNRINQ9P2P1 1898 aaKnown RBP22.96■■□□□ 1.27
HOMER3-204ENST00000539827 SDR42E2A6NKP2 422 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 PRRG1O14668 218 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 SPAG7O75391 227 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 AP2A1O95782 977 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 RING1Q06587 406 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 ZNF33AQ06730 810 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 CIR1Q86X95 450 aaPredicted RBP22.96■■□□□ 1.27
HOMER3-204ENST00000539827 OVCA2Q8WZ82 227 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 MYEOVQ96EZ4 313 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 PRMT1Q99873 361 aaKnown RBP22.96■■□□□ 1.27
HOMER3-204ENST00000539827 MLXIPLQ9NP71 852 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 UBP1Q9NZI7 540 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 HSFX1Q9UBD0 423 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 HBS1LQ9Y450 684 aaKnown RBP22.96■■□□□ 1.27
HOMER3-204ENST00000539827 ACTL7BQ9Y614 415 aa22.96■■□□□ 1.27
HOMER3-204ENST00000539827 CXorf49A8MYA2 514 aaPredicted RBP22.95■■□□□ 1.26
HOMER3-204ENST00000539827 MATN3O15232 486 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 C1QAP02745 245 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 HSPA1AP0DMV8 641 aaKnown RBP22.95■■□□□ 1.26
HOMER3-204ENST00000539827 HSPA1BP0DMV9 641 aaKnown RBP22.95■■□□□ 1.26
HOMER3-204ENST00000539827 ELF1P32519 619 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 TWF1Q12792 350 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 LRRC14Q15048 493 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 HECTD3Q5T447 861 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 CTAGE3PQ8IX95 158 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 PPM1NQ8N819 430 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 CDK5RAP1Q96SZ6 601 aaKnown RBP22.95■■□□□ 1.26
HOMER3-204ENST00000539827 SMYD2Q9NRG4 433 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 MRPL17Q9NRX2 175 aaKnown RBP22.95■■□□□ 1.26
HOMER3-204ENST00000539827 TMEM248Q9NWD8 314 aa22.95■■□□□ 1.26
HOMER3-204ENST00000539827 SYBUQ9NX95 663 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms