RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 DNAAF2Q9NVR5 837 aaKnown RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 RRN3Q9NYV6 651 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 SERGEFQ9UGK8 458 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 WASF3Q9UPY6 502 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 ZZEF1O43149 2961 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 TARSL2A2RTX5 802 aaKnown RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 LGALS16A8MUM7 142 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 MEI4A8MW99 385 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 CNTN5O94779 1100 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 CEACAM1P13688 526 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 CD59P13987 128 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 VAV1P15498 845 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 SOX5P35711 763 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 ST8SIA6P61647 398 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 CDR2Q01850 454 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 MYL5Q02045 173 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 SYCP1Q15431 976 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 STX1AQ16623 288 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 RABGAP1LQ5R372 815 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 FAM102AQ5T9C2 384 aaPredicted RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 CCDC117Q8IWD4 279 aaPredicted RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 ZCCHC9Q8N567 271 aaKnown RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 DEFB124Q8NES8 71 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 FRS2Q8WU20 508 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 RPRD1AQ96P16 312 aaPredicted RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 PCDHB18PQ96TA0 734 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 FEM1AQ9BSK4 669 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 TKTL2Q9H0I9 626 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 PABPC3Q9H361 631 aaKnown RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 NLRC4Q9NPP4 1024 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 TMEM63CQ9P1W3 806 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 SUSD2Q9UGT4 822 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 TBC1D30Q9Y2I9 924 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.28■□□□□ 0.36
DDB1-215ENST00000539712 WDFY3Q8IZQ1 3526 aa17.28■□□□□ 0.36
DDB1-215ENST00000539712 USP24Q9UPU5 2620 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 A0A1B0GTW7 788 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 GOLGA8SH3BPF8 625 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 MOCS3O95396 460 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 DNTTP04053 509 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 GNSP15586 552 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 MMP8P22894 467 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 SULT1E1P49888 294 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 VASPP50552 380 aaPredicted RBP17.27■□□□□ 0.36
DDB1-215ENST00000539712 SHC2P98077 582 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 PTP4A2Q12974 167 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 GRIK2Q13002 908 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 MTA1Q13330 715 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 RAB6CQ53S08 254 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 ALFQ53S48 1182 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 BRMS1LQ5PSV4 323 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 CCDC183Q5T5S1 534 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 USP30Q70CQ3 517 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 ARCQ7LC44 396 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 ZNF677Q86XU0 584 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 BIRC7Q96CA5 298 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 SIK2Q9H0K1 926 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 RAB6CQ9H0N0 254 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 WDCPQ9H6R7 721 aa17.27■□□□□ 0.36
DDB1-215ENST00000539712 EDDM13A0A1B0GTR0 161 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 DRGXA6NNA5 263 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 MID1O15344 667 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 BCAT2O15382 392 aaPredicted RBP17.26■□□□□ 0.35
DDB1-215ENST00000539712 ENDOD1O94919 500 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 SEMA4FO95754 770 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 F9P00740 461 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 IGHV4-34P06331 123 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 SYPP08247 313 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 CST6Q15828 149 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 FKBP15Q5T1M5 1219 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 MMAAQ8IVH4 418 aaKnown RBP17.26■□□□□ 0.35
DDB1-215ENST00000539712 STK40Q8N2I9 435 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 SLC30A5Q8TAD4 765 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 C1orf74Q96LT6 269 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 CFAP57Q96MR6 1250 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 ERGIC2Q96RQ1 377 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 BTBD1Q9H0C5 482 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 MIR1-1HGQ9H1L0 117 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 SGK2Q9HBY8 427 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 FBXL12Q9NXK8 326 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 ZNF212Q9UDV6 495 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 STAP1Q9ULZ2 295 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 SCML1Q9UN30 329 aa17.26■□□□□ 0.35
DDB1-215ENST00000539712 IGLV3-10A0A075B6K4 115 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
DDB1-215ENST00000539712 GOLGA6L22H0YM25 854 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 ATP9BO43861 1147 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 OPHN1O60890 802 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 CLDN11O75508 207 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 MBD3O95983 291 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 UNGP13051 313 aaPredicted RBP17.25■□□□□ 0.35
DDB1-215ENST00000539712 ATP1A3P13637 1013 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 SLC8A1P32418 973 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 ATXN3P54252 364 aaPredicted RBP17.25■□□□□ 0.35
DDB1-215ENST00000539712 GALCP54803 685 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 CDH4P55283 916 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 OXCT1P55809 520 aa17.25■□□□□ 0.35
DDB1-215ENST00000539712 FAM193AP78312 1265 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms