RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 USP17L7P0C7H9 530 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 RARAP10276 462 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ALADP13716 330 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TNFRSF8P28908 595 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SERPINH1P50454 418 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 BTG3Q14201 252 aaPredicted RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 C15orf52Q6ZUT6 534 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DEFB128Q7Z7B8 93 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 LGI2Q8N0V4 545 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ANKRD49Q8WVL7 239 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 BBS4Q96RK4 519 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DNMT3LQ9UJW3 386 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CDH9Q9ULB4 789 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ADCY6O43306 1168 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 UBOX5O94941 541 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 LTFP02788 710 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 PTPN1P18031 435 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 BDNFP23560 247 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TMED10P49755 219 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 FRG1Q14331 258 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DEFB107AQ8IZN7 70 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DEFB106AQ8N104 65 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SETD9Q8NE22 299 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ETNPPLQ8TBG4 499 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 PPP1R16AQ96I34 528 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SENP8Q96LD8 212 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 C9orf16Q9BUW7 83 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MYH2Q9UKX2 1941 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 RICTORQ6R327 1708 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TRAV19A0A0A6YYK7 116 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 NDUFB5O43674 189 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 RECQL4O94761 1208 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DGKAP23743 735 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 RPL9P32969 192 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 GPR15P49685 360 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 AADATQ8N5Z0 425 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SLC2A14Q8TDB8 520 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MCCC1Q96RQ3 725 aaPredicted RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SEMA4AQ9H3S1 761 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 GNPTGQ9UJJ9 305 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 BTNL10A8MVZ5 291 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 QSOX1O00391 747 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CLTBP09497 229 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 FGFR1P11362 822 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SERPINA4P29622 427 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 IKBKEQ14164 716 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DPYSL3Q14195 570 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 KCNT2Q6UVM3 1135 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC149Q6ZUS6 474 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CENPTQ96BT3 561 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ZFRQ96KR1 1074 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 HSFY1Q96LI6 401 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ATXN3LQ9H3M9 355 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MID1IP1Q9NPA3 183 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ETNK2Q9NVF9 386 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ADPRHL2Q9NX46 363 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 RAB21Q9UL25 225 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TPRKBQ9Y3C4 175 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC189A1A4V9 331 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 NPR3P17342 541 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TNNI3P19429 210 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 C1orf186Q6ZWK4 172 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 FAM228AQ86W67 206 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF75CPQ92670 426 aaPredicted RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 HPS4Q9NQG7 708 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 OPTCQ9UBM4 332 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ADAM28Q9UKQ2 775 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SESN1Q9Y6P5 492 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MST1RQ04912 1400 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CENPXA8MT69 81 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TSPAN3O60637 253 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 GNRH1P01148 92 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ANXA6P08133 673 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 IL2P60568 153 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SNRPD1P62314 119 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 IL5RAQ01344 420 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SAMD4BQ5PRF9 694 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 LRRC49Q8IUZ0 686 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SYTL1Q8IYJ3 562 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ST13P5Q8NFI4 369 aaPredicted RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 METTL6Q8TCB7 284 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CELF6Q96J87 481 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MTMR9Q96QG7 549 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ADI1Q9BV57 179 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 OSBPL6Q9BZF3 934 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 NRDE2Q9H7Z3 1164 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 KCND1Q9NSA2 647 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 NINJ2Q9NZG7 142 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ARHGAP28Q9P2N2 729 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DDX20Q9UHI6 824 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SNX6Q9UNH7 406 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 PCDHGC5Q9Y5F6 944 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TIMM13Q9Y5L4 95 aaPredicted RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SF3B1O75533 1304 aaKnown RBP eCLIP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 PQBP1O60828 265 aaKnown RBP6.59□□□□□ -1.35
LSAMP-207ENST00000539563 MTA2O94776 668 aa6.59□□□□□ -1.35
LSAMP-207ENST00000539563 EPN2O95208 641 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms