RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PLK1P53350 603 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 SMTNL2Q2TAL5 461 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 HSF5Q4G112 596 aaPredicted RBP16.19■□□□□ 0.18
RPAIN-206ENST00000539417 EFHC2Q5JST6 749 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 KCNT1Q5JUK3 1230 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 TSTD1Q8NFU3 115 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 OR7D4Q8NG98 312 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 SLC35G2Q8TBE7 412 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 DHX35Q9H5Z1 703 aaKnown RBP16.19■□□□□ 0.18
RPAIN-206ENST00000539417 CD93Q9NPY3 652 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 ZSCAN32Q9NX65 697 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 USP18Q9UMW8 372 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 ERVW-1Q9UQF0 538 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 INVSQ9Y283 1065 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 TIMM44O43615 452 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 CREB3O43889 395 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 SNAP91O60641 907 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 LILRB5O75023 590 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 RNF8O76064 485 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 APBB3O95704 486 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 RHOCP08134 193 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 DLDP09622 509 aaKnown RBP16.18■□□□□ 0.18
RPAIN-206ENST00000539417 GABRG2P18507 467 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 OR1E1P30953 314 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 HOXA6P31267 233 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 ACVRL1P37023 503 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 MAGEA1P43355 309 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 SLC25A11Q02978 314 aaKnown RBP16.18■□□□□ 0.18
RPAIN-206ENST00000539417 FNDC3BQ53EP0 1204 aaKnown RBP16.18■□□□□ 0.18
RPAIN-206ENST00000539417 ERMARDQ5T6L9 678 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 TRMT11Q7Z4G4 463 aaKnown RBP16.18■□□□□ 0.18
RPAIN-206ENST00000539417 RASSF3Q86WH2 238 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 CCDC117Q8IWD4 279 aaPredicted RBP16.18■□□□□ 0.18
RPAIN-206ENST00000539417 FRMD1Q8N878 549 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 NIPA2Q8N8Q9 360 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 NETO2Q8NC67 525 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 UCMAQ8WVF2 138 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 TBC1D31Q96DN5 1066 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 NOL6Q9H6R4 1146 aaKnown RBP16.18■□□□□ 0.18
RPAIN-206ENST00000539417 ZWILCHQ9H900 591 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 IP6K2Q9UHH9 426 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 DNAI1Q9UI46 699 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 ACTL7AQ9Y615 435 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 CKAP5Q14008 2032 aa16.18■□□□□ 0.18
RPAIN-206ENST00000539417 TMEM110-MUSTN1A8MSY1 372 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 MYO1FO00160 1098 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 PRPSAP2O60256 369 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 VAV1P15498 845 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 PCK1P35558 622 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 DGKEP52429 567 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 TAS2R40P59535 323 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 PIGHQ14442 188 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-206ENST00000539417 ATP13A4Q4VNC1 1196 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 SERPINA13PQ6UXR4 307 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-206ENST00000539417 WDR5BQ86VZ2 330 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 CAMKK1Q8N5S9 505 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 ZNF557Q8N988 423 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-206ENST00000539417 HMGB4Q8WW32 186 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 IMPACTQ9P2X3 320 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 UVRAGQ9P2Y5 699 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 ARIH1Q9Y4X5 557 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-206ENST00000539417 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
RPAIN-206ENST00000539417 A0A0U1RQJ8 604 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 TTC34A8MYJ7 566 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 EIF3CLB5ME19 914 aaKnown RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 DCLK1O15075 740 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 AXIN1O15169 862 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 PROSCO94903 275 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 NDUFA10O95299 355 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 MT-CO1P00395 513 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 EPHX1P07099 455 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 RARAP10276 462 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 RHOQP17081 205 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 GOT1P17174 413 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 NDUFV2P19404 249 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 EPHB2P29323 1055 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 NBL1P41271 181 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 COPAP53621 1224 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 AIF1P55008 147 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 ECT2LQ008S8 904 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 SLC12A1Q13621 1099 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 MESDQ14696 234 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 LONP2Q86WA8 852 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 CCDC170Q8IYT3 715 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 ACRBPQ8NEB7 543 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 ATRIPQ8WXE1 791 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 RLN3Q8WXF3 142 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 EIF3CQ99613 913 aaKnown RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 MKRN2Q9H000 416 aaKnown RBP16.16■□□□□ 0.18
RPAIN-206ENST00000539417 MUC3BQ9H195 1237 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 TMEM248Q9NWD8 314 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 EBF1Q9UH73 591 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 VPS28Q9UK41 221 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 PLA2G4CQ9UP65 541 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 MFHAS1Q9Y4C4 1052 aa16.16■□□□□ 0.18
RPAIN-206ENST00000539417 PCDHGA2Q9Y5H1 932 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms