RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FAM167BQ9BTA0 163 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 SEZ6LQ9BYH1 1024 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 EMCNQ9ULC0 261 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 MFHAS1Q9Y4C4 1052 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 HAS3O00219 553 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 RNF103O00237 685 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 TPP1O14773 563 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 HCRTO43612 131 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 MFSD11O43934 449 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 PLIN3O60664 434 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 RECQL4O94761 1208 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 FGF3P11487 239 aaPredicted RBP14.9□□□□□ -0.02
CDCA3-207ENST00000538862 AOC1P19801 751 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 GRK2P25098 689 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 CDC25CP30307 473 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 AXLP30530 894 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 NOS2P35228 1153 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 CPA2P48052 419 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 SLC1A6P48664 564 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 TRMT5Q32P41 509 aaKnown RBP14.9□□□□□ -0.02
CDCA3-207ENST00000538862 TEDDM1Q5T9Z0 273 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 N4BP2L1Q5TBK1 243 aaPredicted RBP14.9□□□□□ -0.02
CDCA3-207ENST00000538862 ZCCHC23Q6ZST2 131 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 BNIPLQ7Z465 357 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 FAM131BQ86XD5 332 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC33Q8N5R6 958 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 APPL2Q8NEU8 664 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 SLC2A14Q8TDB8 520 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 RNF139Q8WU17 664 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 NRG4Q8WWG1 115 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 NT5C3BQ969T7 300 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 TNIP3Q96KP6 325 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 FAM161BQ96MY7 647 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 IGSF9Q9P2J2 1179 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 MARCOQ9UEW3 520 aaPredicted RBP14.9□□□□□ -0.02
CDCA3-207ENST00000538862 NOD1Q9Y239 953 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 LRCH1Q9Y2L9 728 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 HES2Q9Y543 173 aa14.9□□□□□ -0.02
CDCA3-207ENST00000538862 KLHL33A6NCF5 533 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 CIB2O75838 187 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 KLHL2O95198 593 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 SERPINE1P05121 402 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 POLBP06746 335 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 ITGA2BP08514 1039 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 SKIP12755 728 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 KCNE1P15382 129 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 PAX7P23759 505 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 MGAT1P26572 445 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 TAF6P49848 677 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 SESN3P58005 492 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 KLC1Q07866 573 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 LBRQ14739 615 aaKnown RBP14.89□□□□□ -0.03
CDCA3-207ENST00000538862 PAFAH1B3Q15102 231 aaKnown RBP14.89□□□□□ -0.03
CDCA3-207ENST00000538862 XKR4Q5GH76 650 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 UNC5BQ8IZJ1 945 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 PPFIBP2Q8ND30 876 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 ITFG2Q969R8 447 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 FAM136AQ96C01 138 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 SPDL1Q96EA4 605 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 FAM210AQ96ND0 272 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 HNRNPABQ99729 332 aaKnown RBP14.89□□□□□ -0.03
CDCA3-207ENST00000538862 KATNAL1Q9BW62 490 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 DUSP16Q9BY84 665 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 SETD4Q9NVD3 440 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 DNAJB4Q9UDY4 337 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 ANGPTL2Q9UKU9 493 aa14.89□□□□□ -0.03
CDCA3-207ENST00000538862 SMIM28A0A1B0GU29 152 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SPTLC1O15269 473 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 TOP3BO95985 862 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 MYL4P12829 197 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 DARSP14868 501 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ALDH18A1P54886 795 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SESN2P58004 480 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 PDE1BQ01064 536 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 KDSRQ06136 332 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 TUBB3Q13509 450 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 RCN2Q14257 317 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SPANXN3Q5MJ09 141 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 GRTP1Q5TC63 336 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 IRGCQ6NXR0 463 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 C16orf59Q7L2K0 433 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 PIGZQ86VD9 579 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 TET1Q8NFU7 2136 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SCG3Q8WXD2 468 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 NPY6RQ99463 290 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 CPNE1Q99829 537 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 NXF3Q9H4D5 531 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 STAP1Q9ULZ2 295 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 GINS2Q9Y248 185 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 DNAJC16Q9Y2G8 782 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 SMIM35A0A1B0GVV1 85 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 PRR5-ARHGAP8B1AHC4 643 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 HUS1O60921 280 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 PROCP04070 461 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 GP5P40197 560 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 GARSP41250 739 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 ACTR3P61158 418 aa14.88□□□□□ -0.03
CDCA3-207ENST00000538862 RPL10AP62906 217 aaKnown RBP14.88□□□□□ -0.03
CDCA3-207ENST00000538862 CRADDP78560 199 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms