RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 C18orf8Q96DM3 657 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 TBCBQ99426 244 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 SIK2Q9H0K1 926 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 RSPH9Q9H1X1 276 aaPredicted RBP15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ANLNQ9NQW6 1124 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 TMPRSS4Q9NRS4 437 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 SLCO3A1Q9UIG8 710 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 STAP1Q9ULZ2 295 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 SLCO1B1Q9Y6L6 691 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 CABIN1Q9Y6J0 2220 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ITIH6Q6UXX5 1313 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 A0A1B0GTW7 788 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 I6L893 689 aaPredicted RBP15.42■□□□□ 0.06
RAB40B-202ENST00000538809 MID1O15344 667 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 OPHN1O60890 802 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 SEMA4FO95754 770 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 CYP1A1P04798 512 aaPredicted RBP15.42■□□□□ 0.06
RAB40B-202ENST00000538809 SYPP08247 313 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 VAV1P15498 845 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 CSRP1P21291 193 aaKnown RBP15.42■□□□□ 0.06
RAB40B-202ENST00000538809 FLT3P36888 993 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 FMO1Q01740 532 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 CDR2Q01850 454 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 ZBTB16Q05516 673 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 DEUP1Q05D60 604 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 C9orf64Q5T6V5 341 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 CAVIN1Q6NZI2 390 aaKnown RBP15.42■□□□□ 0.06
RAB40B-202ENST00000538809 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 GANCQ8TET4 914 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 BTBD1Q9H0C5 482 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 TKTL2Q9H0I9 626 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 PABPC3Q9H361 631 aaKnown RBP15.42■□□□□ 0.06
RAB40B-202ENST00000538809 SERGEFQ9UGK8 458 aa15.42■□□□□ 0.06
RAB40B-202ENST00000538809 BCAT2O15382 392 aaPredicted RBP15.41■□□□□ 0.06
RAB40B-202ENST00000538809 PSMD8P48556 350 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 CXCR3P49682 368 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 UBXN1Q04323 297 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 FOXC1Q12948 553 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 SEMA3BQ13214 749 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 CST6Q15828 149 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 BRMS1LQ5PSV4 323 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 BNIPLQ7Z465 357 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 PHLDB2Q86SQ0 1253 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 MMAAQ8IVH4 418 aaKnown RBP15.41■□□□□ 0.06
RAB40B-202ENST00000538809 STK40Q8N2I9 435 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 KDM1BQ8NB78 822 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 MSANTD4Q8NCY6 345 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 PGAP3Q96FM1 320 aaPredicted RBP15.41■□□□□ 0.06
RAB40B-202ENST00000538809 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
RAB40B-202ENST00000538809 CFAP57Q96MR6 1250 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 SPAG5Q96R06 1193 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 WDCPQ9H6R7 721 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 METTL5Q9NRN9 209 aaKnown RBP15.41■□□□□ 0.06
RAB40B-202ENST00000538809 ARHGEF38Q9NXL2 777 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 RRN3Q9NYV6 651 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 TMEM59LQ9UK28 342 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 ANGPTL2Q9UKU9 493 aa15.41■□□□□ 0.06
RAB40B-202ENST00000538809 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.41■□□□□ 0.06
RAB40B-202ENST00000538809 PTPRBP23467 1997 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 A0A1W2PP55 124 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 FAM47DPA6NHR8 397 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 RNASEH1O60930 286 aaKnown RBP15.4■□□□□ 0.06
RAB40B-202ENST00000538809 CNTN5O94779 1100 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 FSBPO95073 299 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 CEACAM1P13688 526 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
RAB40B-202ENST00000538809 STAT1P42224 750 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 BNC1Q01954 994 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 SLC12A1Q13621 1099 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 ARID5BQ14865 1188 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 SLC25A52Q3SY17 297 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 ALFQ53S48 1182 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 LAYNQ6UX15 382 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 SND1Q7KZF4 910 aaKnown RBP eCLIP15.4■□□□□ 0.06
RAB40B-202ENST00000538809 ARCQ7LC44 396 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 EMC1Q8N766 993 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 NEK11Q8NG66 645 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 PCDHB18PQ96TA0 734 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 C11orf70Q9BRQ4 267 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 PCED1AQ9H1Q7 454 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 DNAAF2Q9NVR5 837 aaKnown RBP15.4■□□□□ 0.06
RAB40B-202ENST00000538809 FBXL12Q9NXK8 326 aa15.4■□□□□ 0.06
RAB40B-202ENST00000538809 CACNA1BQ00975 2339 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.39■□□□□ 0.05
RAB40B-202ENST00000538809 SPAARA0A1B0GVQ0 90 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 TARSL2A2RTX5 802 aaKnown RBP15.39■□□□□ 0.05
RAB40B-202ENST00000538809 TEX33O43247 280 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 GJB3O75712 270 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 GJB6O95452 261 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 UNGP13051 313 aaPredicted RBP15.39■□□□□ 0.05
RAB40B-202ENST00000538809 CD59P13987 128 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 MMP8P22894 467 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 PLK1P53350 603 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 PTP4A2Q12974 167 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 MTA1Q13330 715 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 ZNF177Q13360 481 aaPredicted RBP15.39■□□□□ 0.05
RAB40B-202ENST00000538809 IQCB1Q15051 598 aa15.39■□□□□ 0.05
RAB40B-202ENST00000538809 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms