RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 NFKB1P19838 968 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 CYP2C18P33260 490 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 PGFP49763 221 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 TMPRSS15P98073 1019 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 TSPY1Q01534 308 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 ZNF33AQ06730 810 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 FRG1Q14331 258 aaKnown RBP14.34□□□□□ -0.11
LIMK1-208ENST00000538333 ATG16L1Q676U5 607 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 RASSF3Q86WH2 238 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 KLHDC8BQ8IXV7 354 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 THEM5Q8N1Q8 247 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 C20orf27Q9GZN8 174 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 ZFATQ9P243 1243 aa14.34□□□□□ -0.11
LIMK1-208ENST00000538333 USP1O94782 785 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 MYL2P10916 166 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 SERPINB3P29508 390 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 HOXC13P31276 330 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 SLC8A1P32418 973 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 GP5P40197 560 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 SLC5A3P53794 718 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 ITGA7Q13683 1181 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 DBN1Q16643 649 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 ITPRIPL1Q6GPH6 555 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 ZNF784Q8NCA9 323 aaPredicted RBP14.33□□□□□ -0.11
LIMK1-208ENST00000538333 ISL2Q96A47 359 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 CELF6Q96J87 481 aaKnown RBP14.33□□□□□ -0.11
LIMK1-208ENST00000538333 RAB3IPQ96QF0 476 aaPredicted RBP14.33□□□□□ -0.11
LIMK1-208ENST00000538333 CPNE1Q99829 537 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 ZNF395Q9H8N7 513 aaPredicted RBP14.33□□□□□ -0.11
LIMK1-208ENST00000538333 FBXO6Q9NRD1 293 aaPredicted RBP14.33□□□□□ -0.11
LIMK1-208ENST00000538333 BFARQ9NZS9 450 aa14.33□□□□□ -0.11
LIMK1-208ENST00000538333 CCDC195A0A1B0GUA6 201 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 FAM237BA0A1B0GVD1 139 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 C2orf71A6NGG8 1288 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 CACNG3O60359 315 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 GLRA3O75311 464 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 PRKCGP05129 697 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 ELNP15502 786 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 MAGEA12P43365 314 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 BRMS1LQ5PSV4 323 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 RTN4RL1Q86UN2 441 aaPredicted RBP14.33□□□□□ -0.12
LIMK1-208ENST00000538333 ARHGAP12Q8IWW6 846 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 CNTD1Q8N815 330 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
LIMK1-208ENST00000538333 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
LIMK1-208ENST00000538333 RNF34Q969K3 372 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 ZNF669Q96BR6 464 aaPredicted RBP14.33□□□□□ -0.12
LIMK1-208ENST00000538333 PRR11Q96HE9 360 aaPredicted RBP14.33□□□□□ -0.12
LIMK1-208ENST00000538333 TSGA13Q96PP4 275 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 HAPLN3Q96S86 360 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 TBC1D10AQ9BXI6 508 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 SMOC2Q9H3U7 446 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 ABCC13Q9NSE7 274 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 KCNK4Q9NYG8 393 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 PCDHB8Q9UN66 801 aa14.33□□□□□ -0.12
LIMK1-208ENST00000538333 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ARHGEF37A1IGU5 675 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ARHGAP42A6NI28 874 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 PLIN3O60664 434 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 HAUS5O94927 633 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 JCHAINP01591 159 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 RASSF2P50749 326 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 YWHAHQ04917 246 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 DSC1Q08554 894 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 SMAD1Q15797 465 aaKnown RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ANKRD20A4Q4UJ75 823 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 CERCAMQ5T4B2 595 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 WLSQ5T9L3 541 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 N4BP2L1Q5TBK1 243 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 GRTP1Q5TC63 336 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 FAM91A1Q658Y4 838 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 SCD5Q86SK9 330 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 AGAP11Q8TF27 550 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 PTCD3Q96EY7 689 aaKnown RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 TLE6Q9H808 572 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 RGS18Q9NS28 235 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 HNRNPCL1O60812 293 aaKnown RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 DDHD2O94830 711 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 SRGAP2BP0DMP2 458 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 PTPN4P29074 926 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 CDK18Q07002 472 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 MBLAC2Q68D91 279 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 C16orf46Q6P387 395 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 TRAF7Q6Q0C0 670 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 C4orf50Q6ZRC1 276 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ARHGAP36Q6ZRI8 547 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ZNF280BQ86YH2 543 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 SPATA2LQ8IUW3 424 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 CASP10Q92851 521 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 MFSD3Q96ES6 412 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ZNF419Q96HQ0 510 aaPredicted RBP14.32□□□□□ -0.12
LIMK1-208ENST00000538333 RBBP8Q99708 897 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 SIK2Q9H0K1 926 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 ARL8BQ9NVJ2 186 aa14.32□□□□□ -0.12
LIMK1-208ENST00000538333 DCDC2Q9UHG0 476 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms