RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 MICAL3Q7RTP6 2002 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 LDHBP07195 334 aaKnown RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 FGF3P11487 239 aaPredicted RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 PCP11498 1178 aaKnown RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 EPHX2P34913 555 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ACADSBP45954 432 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 KLF10Q13118 480 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 SLC13A2Q13183 592 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 NDUFA5Q16718 116 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ANO4Q32M45 955 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 NHSL2Q5HYW2 709 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 KCTD8Q6ZWB6 473 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 UBR7Q8N806 425 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 BPIFB6Q8NFQ5 453 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ZUFSPQ96AP4 578 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 SLCO4A1Q96BD0 722 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 RCN3Q96D15 328 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 MAGED4Q96JG8 741 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 P2RX7Q99572 595 aaKnown RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 FAM126AQ9BYI3 521 aaPredicted RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 SERPINB13Q9UIV8 391 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 SLC8A2Q9UPR5 921 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 SHOC2Q9UQ13 582 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 SNCAIPQ9Y6H5 919 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 KLHL2O95198 593 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 F7P08709 466 aaPredicted RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 MX2P20592 715 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 MAP4P27816 1152 aaKnown RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 SLC1A6P48664 564 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 IST1P53990 364 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 RAD23AP54725 363 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 COPZ1P61923 177 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 PSMC5P62195 406 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 AQP6Q13520 282 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 COL19A1Q14993 1142 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ACAP2Q15057 778 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ACAD10Q6JQN1 1059 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 TTC33Q6PID6 262 aaPredicted RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 USP37Q86T82 979 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 NDUFAF2Q8N183 169 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ABHD11Q8NFV4 315 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 ZFP90Q8TF47 636 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 HTRA1Q92743 480 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 CMTM5Q96DZ9 223 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 FIZ1Q96SL8 496 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 TDRD1Q9BXT4 1180 aaKnown RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 FOXP3Q9BZS1 431 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 MIR1-1HGQ9H1L0 117 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 XPO7Q9UIA9 1087 aaKnown RBP10.92□□□□□ -0.66
RTN3-208ENST00000537981 PCDHAC2Q9Y5I4 1007 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 IKBKGQ9Y6K9 419 aa10.92□□□□□ -0.66
RTN3-208ENST00000537981 AP3B1O00203 1094 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CLPXO76031 633 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CSH1P0DML2 217 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CSH2P0DML3 217 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 GRIA1P42261 906 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 PHC1P78364 1004 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SPCS2Q15005 226 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 INO80DQ53TQ3 878 aaPredicted RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 FAM219BQ5XKK7 198 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 MBLAC2Q68D91 279 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 CYP2R1Q6VVX0 501 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 HEATR4Q86WZ0 1026 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 MCOLN2Q8IZK6 566 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 OR2T3Q8NH03 318 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 PPP1R14CQ8TAE6 165 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SH3YL1Q96HL8 342 aaPredicted RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 PARVGQ9HBI0 331 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TOPORSQ9NS56 1045 aaPredicted RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 TBC1D22BQ9NU19 505 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 NUDT5Q9UKK9 219 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 EMCNQ9ULC0 261 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 GOLGA8IPA6NC78 632 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TRIM64BA6NI03 449 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SAC3D1A6NKF1 404 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 GOLGA8JA6NMD2 632 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 MEN1O00255 615 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 NEMP1O14524 444 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 ACOT8O14734 319 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 AKAP10O43572 662 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SNAP91O60641 907 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TBCAO75347 108 aaKnown RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 FOSL1P15407 271 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 MAGP20916 626 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 IFNA8P32881 189 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 RPL22P35268 128 aaKnown RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 HSPA13P48723 471 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 RPL7AP62424 266 aaKnown RBP10.91□□□□□ -0.66
RTN3-208ENST00000537981 BFSP2Q13515 415 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 DLG2Q15700 870 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 SNAP47Q5SQN1 464 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 C12orf60Q5U649 245 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TMEM198Q66K66 360 aa10.91□□□□□ -0.66
RTN3-208ENST00000537981 TTC23LQ6PF05 361 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms