RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SIN3BO75182 1162 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 ZNF217O75362 1048 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 CLDN11O75508 207 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 FTLP02792 175 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-206ENST00000536429 ASLP04424 464 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 VAV1P15498 845 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 ADRA1BP35368 520 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 PLK1P53350 603 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 CDH4P55283 916 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 ECT2LQ008S8 904 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 RPL6Q02878 288 aaKnown RBP13.54□□□□□ -0.24
PRKDC-206ENST00000536429 ZNF177Q13360 481 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-206ENST00000536429 MAMLD1Q13495 774 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 CSRP2Q16527 193 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 HNRNPA1L2Q32P51 320 aaKnown RBP13.54□□□□□ -0.24
PRKDC-206ENST00000536429 MANEALQ5VSG8 457 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 RNF219Q5W0B1 726 aaPredicted RBP13.54□□□□□ -0.24
PRKDC-206ENST00000536429 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 SLC41A1Q8IVJ1 513 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 RMDN1Q96DB5 314 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 PSMB7Q99436 277 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 FEM1AQ9BSK4 669 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 NEU3Q9UQ49 428 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 TBC1D30Q9Y2I9 924 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 PAXBP1Q9Y5B6 917 aa13.54□□□□□ -0.24
PRKDC-206ENST00000536429 ATXN2Q99700 1313 aaKnown RBP13.54□□□□□ -0.24
PRKDC-206ENST00000536429 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 PATE3B3GLJ2 98 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 SNAP91O60641 907 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 MOCS3O95396 460 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 RHOCP08134 193 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ITPKAP23677 461 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 CASP14P31944 242 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 TPMTP51580 245 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ZNF143P52747 638 aaPredicted RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 RPS14P62263 151 aaKnown RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ZBED6P86452 979 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 E2F5Q15329 346 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 TDRD12Q587J7 1177 aaKnown RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 C9orf64Q5T6V5 341 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 PLEKHA7Q6IQ23 1121 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 LRRC31Q6UY01 552 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 METTL3Q86U44 580 aaKnown RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 PYROXD2Q8N2H3 581 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 PRCCQ92733 491 aaPredicted RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 TMEM74BQ9NUR3 256 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 NDFIP2Q9NV92 336 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 ITIH6Q6UXX5 1313 aa13.53□□□□□ -0.24
PRKDC-206ENST00000536429 CKAP5Q14008 2032 aa13.52□□□□□ -0.24
PRKDC-206ENST00000536429 AP5Z1O43299 807 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 MT-CO1P00395 513 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 SRPRAP08240 638 aaKnown RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 ZNF806P0C7X5 589 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 GZMAP12544 262 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 GLDCP23378 1020 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 CD6P30203 668 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 SLC12A1Q13621 1099 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 RSPO4Q2I0M5 234 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 DCUN1D2Q6PH85 259 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 CYP2U1Q7Z449 544 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 FAM124AQ86V42 546 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 ARFGAP1Q8N6T3 406 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 GPR161Q8N6U8 529 aaKnown RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 OR7D4Q8NG98 312 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 FRS2Q8WU20 508 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 PIGKQ92643 395 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 SYN2Q92777 582 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 PTPRN2Q92932 1015 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 CNPY3Q9BT09 278 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 MUC3BQ9H195 1237 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 OSBPL2Q9H1P3 480 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 CNOT8Q9UFF9 292 aaKnown RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 OR12D3Q9UGF7 316 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 SUN2Q9UH99 717 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 ADAMTS1Q9UHI8 967 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 VPS28Q9UK41 221 aa13.52□□□□□ -0.25
PRKDC-206ENST00000536429 LUC7L2Q9Y383 392 aaKnown RBP13.52□□□□□ -0.25
PRKDC-206ENST00000536429 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.51□□□□□ -0.25
PRKDC-206ENST00000536429 K7ERQ8 282 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 RTN2O75298 545 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 LRIG2O94898 1065 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 IGLV3-19P01714 112 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 SERPING1P05155 500 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 C7P10643 843 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 ACADMP11310 421 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 OXCT1P55809 520 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 LMNB2Q03252 620 aa13.51□□□□□ -0.25
PRKDC-206ENST00000536429 ARID5BQ14865 1188 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms