RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 UBR7Q8N806 425 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 ATP6V0D2Q8N8Y2 350 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 OR8D1Q8WZ84 308 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 RPL10LQ96L21 214 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 GSDMAQ96QA5 445 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SPAG5Q96R06 1193 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PPP1R9BQ96SB3 815 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SLC25A13Q9UJS0 675 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 INTS6Q9UL03 887 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 NAALADL1Q9UQQ1 740 aa13.4□□□□□ -0.26
TNFRSF1A-207ENST00000535958 LOC400499M0QZD8 3231 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KRT5P13647 590 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ZNF18P17022 549 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TACR2P21452 398 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 NUDT1P36639 197 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 STK19P49842 368 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CLDN6P56747 220 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TARDBPQ13148 414 aaKnown RBP eCLIP13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ILKQ13418 452 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 STAT4Q14765 748 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ACCSLQ4AC99 568 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 COBLL1Q53SF7 1204 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FSCBQ5H9T9 825 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TTC39BQ5VTQ0 682 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TAC4Q86UU9 113 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 AADATQ8N5Z0 425 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RNF34Q969K3 372 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CRELD1Q96HD1 420 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 LMLNQ96KR4 655 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BTN2A3PQ96KV6 586 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FAM204AQ9H8W3 233 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 EBF2Q9HAK2 575 aa13.39□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SLC7A4O43246 635 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MED7O43513 233 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CKMT2P17540 419 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MAT2AP31153 395 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PPP1R2P41236 205 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 NUMBP49757 651 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PPP2CBP62714 309 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PPP2CAP67775 309 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DAB2P98082 770 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GCNT1Q02742 428 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SETMARQ53H47 684 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RRAGAQ7L523 313 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 APCDD1Q8J025 514 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SLC39A13Q96H72 371 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CEP63Q96MT8 703 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FCRL3Q96P31 734 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MED15Q96RN5 788 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 NRSN2Q9GZP1 204 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ERVMER34-1Q9H9K5 563 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 POPDC2Q9HBU9 364 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SLCO3A1Q9UIG8 710 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 DMTF1Q9Y222 760 aa13.38□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 A0A1B0GVM2 712 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 A0A1W2PR77 199 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TCAF2A6NFQ2 919 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 P4HA2O15460 535 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TRUB2O95900 331 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SLC2A3P11169 496 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 GLDCP23378 1020 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ACTN2P35609 894 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 OVGP1Q12889 678 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BNIP3Q12983 259 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SHBQ15464 509 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 ZC3H12AQ5D1E8 599 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 IQCHQ86VS3 1027 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CCAR2Q8N163 923 aaKnown RBP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PTPRN2Q92932 1015 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KAT5Q92993 513 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 MYEOVQ96EZ4 313 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CCDC114Q96M63 670 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CYTH4Q9UIA0 394 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 CLCA2Q9UQC9 943 aa13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF1A-207ENST00000535958 KCNU1A8MYU2 1149 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 TK2O00142 265 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 WNT9AO14904 365 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PMM2O15305 246 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 LATO43561 262 aa13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 PLRG1O43660 514 aaKnown RBP13.36□□□□□ -0.27
TNFRSF1A-207ENST00000535958 BNIP3LO60238 219 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms