RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ARCQ7LC44 396 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 LGI2Q8N0V4 545 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 DEFB119Q8N690 84 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 TMEM35BQ8NCS4 154 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 THAP11Q96EK4 314 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 PPP1R9BQ96SB3 815 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 NPY6RQ99463 290 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 GPR174Q9BXC1 333 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 STK33Q9BYT3 514 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 STIM2Q9P246 746 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 TMEM131Q92545 1883 aa11.15□□□□□ -0.63
CCDC60-202ENST00000535685 ATXN2Q99700 1313 aaKnown RBP11.14□□□□□ -0.63
CCDC60-202ENST00000535685 A0A1B0GVM2 712 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 TCAF2A6NFQ2 919 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 H0Y626 953 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 OPHN1O60890 802 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 LSM8O95777 96 aaKnown RBP11.14□□□□□ -0.63
CCDC60-202ENST00000535685 MOCS2O96007 188 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF883P0CG24 379 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ABCB4P21439 1286 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 MATKP42679 507 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ST8SIA6P61647 398 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ECT2LQ008S8 904 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 TTC31Q49AM3 519 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-202ENST00000535685 BRMS1LQ5PSV4 323 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 RABGAP1LQ5R372 815 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 RAP1GAP2Q684P5 730 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF776Q68DI1 518 aaPredicted RBP11.14□□□□□ -0.63
CCDC60-202ENST00000535685 OR6B2Q6IFH4 312 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF677Q86XU0 584 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 RGL4Q8IZJ4 473 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 CARNMT1Q8N4J0 409 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 MINDY1Q8N5J2 469 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ERLEC1Q96DZ1 483 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 GBP4Q96PP9 640 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 SLC32A1Q9H598 525 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 FAM204AQ9H8W3 233 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 SGK2Q9HBY8 427 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 DDIT4Q9NX09 232 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ANGPTL2Q9UKU9 493 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 WASF3Q9UPY6 502 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 ERVW-1Q9UQF0 538 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 IGF2RP11717 2491 aa11.14□□□□□ -0.63
CCDC60-202ENST00000535685 EDDM13A0A1B0GTR0 161 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 LRRC10BA6NIK2 292 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 MEI4A8MW99 385 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 F8VZ95 297 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 GIPC1O14908 333 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 F9P00740 461 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 DNTTP04053 509 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 CXCR3P49682 368 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 ATXN3P54252 364 aaPredicted RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 RAPGEF1Q13905 1077 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 DCAF12L1Q5VU92 463 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 OTUD1Q5VV17 481 aaPredicted RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 CXorf57Q6NSI4 855 aaKnown RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 BNIPLQ7Z465 357 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 CCAR2Q8N163 923 aaKnown RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 CFAP52Q8N1V2 620 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 HDDC3Q8N4P3 179 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 GPT2Q8TD30 523 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 C18orf8Q96DM3 657 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 ALG14Q96F25 216 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 C1orf74Q96LT6 269 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 CNTNAP3BQ96NU0 1288 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 BTBD1Q9H0C5 482 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 GANQ9H2C0 597 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 PABPC3Q9H361 631 aaKnown RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 ARHGEF38Q9NXL2 777 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 ADAMTS1Q9UHI8 967 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 TPX2Q9ULW0 747 aaKnown RBP11.13□□□□□ -0.63
CCDC60-202ENST00000535685 STAP1Q9ULZ2 295 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 TBC1D30Q9Y2I9 924 aa11.13□□□□□ -0.63
CCDC60-202ENST00000535685 ACACAQ13085 2346 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 RNASEH1O60930 286 aaKnown RBP11.12□□□□□ -0.63
CCDC60-202ENST00000535685 SIN3BO75182 1162 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 CLDN11O75508 207 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 GRAP2O75791 330 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 SEMA4FO95754 770 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
CCDC60-202ENST00000535685 CD59P13987 128 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 MAOBP27338 520 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 ACSL1P33121 698 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 MAPK8P45983 427 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 NOMO3P69849 1222 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF252P-AS1Q0IIN9 211 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 GRIK2Q13002 908 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 AUHQ13825 339 aaKnown RBP11.12□□□□□ -0.63
CCDC60-202ENST00000535685 KRT31Q15323 416 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 UAP1L1Q3KQV9 507 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 SLC25A52Q3SY17 297 aa11.12□□□□□ -0.63
CCDC60-202ENST00000535685 IL27RAQ6UWB1 636 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms