RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NUCKS1Q9H1E3 243 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 POPDC2Q9HBU9 364 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 SLCO3A1Q9UIG8 710 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 HOOK1Q9UJC3 728 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 PPM1HQ9ULR3 514 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 TBC1D30Q9Y2I9 924 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 RAXQ9Y2V3 346 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 OR51B4Q9Y5P0 310 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 A0A1B0GVM2 712 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 TCAF2A6NFQ2 919 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 PPP1R3GB7ZBB8 358 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 M0QYV0 167 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 TLR4O00206 839 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 MCF2LO15068 1137 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 MID1O15344 667 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 PLRG1O43660 514 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 MAGEC1O60732 1142 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 BMP6P22004 513 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 MZF1P28698 734 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 ACADVLP49748 655 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 STIM1Q13586 685 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 CDH18Q13634 790 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 NAPEPLDQ6IQ20 393 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 CCDC117Q8IWD4 279 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 FAM174AQ8TBP5 190 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 CLEC4CQ8WTT0 213 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 ZNF606Q8WXB4 792 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 SLC2A13Q96QE2 648 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 PCDHGC3Q9UN70 934 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 NAALADL1Q9UQQ1 740 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 HS3ST2Q9Y278 367 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 PCDHB4Q9Y5E5 795 aa11.58□□□□□ -0.56
CLSTN3-206ENST00000535668 PLXNA2O75051 1894 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 BICDL2A1A5D9 508 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 GTPBP10A4D1E9 387 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 TRIM49BA6NDI0 452 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 TTC34A8MYJ7 566 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 ENC1O14682 589 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 MED7O43513 233 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 TRUB2O95900 331 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 APOEP02649 317 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 TACR2P21452 398 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 ACP1P24666 158 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 BRD2P25440 801 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 RGS7P49802 495 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 C21orf59P57076 290 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 CYP4F3Q08477 520 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 MORC3Q14149 939 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 SLC45A4Q5BKX6 768 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 FAM46CQ5VWP2 391 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 CXorf57Q6NSI4 855 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 TAC4Q86UU9 113 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 MMAAQ8IVH4 418 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 PPM1KQ8N3J5 372 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 TMEM145Q8NBT3 493 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 ZNF397Q8NF99 534 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 SNX19Q92543 992 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 ERCC4Q92889 916 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 KAT5Q92993 513 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 NT5C3BQ969T7 300 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 NXPE2Q96DL1 559 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 SLC6A18Q96N87 628 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 OMDQ99983 421 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 MTG2Q9H4K7 406 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 CYTH4Q9UIA0 394 aa11.57□□□□□ -0.56
CLSTN3-206ENST00000535668 A0A1W2PP55 124 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 RFPL3O75679 317 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 RNASEH2AO75792 299 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 CKMT2P17540 419 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 CCR1P32246 355 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 HNF1BP35680 557 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 NNMTP40261 264 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 EIF2S3P41091 472 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 CTSOP43234 321 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 KCNH2Q12809 1159 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 ZNF211Q13398 564 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 PROX2Q3B8N5 592 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 ZC3H12AQ5D1E8 599 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 ADAT2Q7Z6V5 191 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 DSG4Q86SJ6 1040 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 CACUL1Q86Y37 369 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 DHX40Q8IX18 779 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 CCAR2Q8N163 923 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 ATP6V0D2Q8N8Y2 350 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 DCBLD1Q8N8Z6 715 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 PGAP3Q96FM1 320 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 FEM1AQ9BSK4 669 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 PREBQ9HCU5 417 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 GPR27Q9NS67 375 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 RRN3Q9NYV6 651 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 SLC12A6Q9UHW9 1150 aa11.56□□□□□ -0.56
CLSTN3-206ENST00000535668 XPO7Q9UIA9 1087 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms