RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ELF4	Q99607	663 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	TSG101	Q99816	390 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	FBXL12	Q9NXK8	326 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	FKBPL	Q9UIM3	349 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	INTS6	Q9UL03	887 aa	Known RBP	11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	TLR6	Q9Y2C9	796 aa		11.96	□□□□□ -0.49
CTNND1-238	ENST00000534647	ITIH6	Q6UXX5	1313 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	LRRC72	A6NJI9	287 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	SMAP	O00193	183 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	KCNK3	O14649	394 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	YKT6	O15498	198 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	FYN	P06241	537 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	LCP1	P13796	627 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	CSK	P41240	450 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	C21orf59	P57076	290 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	KCNH2	Q12809	1159 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	CST6	Q15828	149 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	TMEM270	Q6UE05	265 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	RBM43	Q6ZSC3	357 aa	Known RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	ADAT2	Q7Z6V5	191 aa	Known RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	OR2T34	Q8NGX1	318 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	FCRL2	Q96LA5	508 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	SERPINB11	Q96P15	392 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	FAM129B	Q96TA1	746 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	ZSWIM1	Q9BR11	485 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	RBSN	Q9H1K0	784 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	NEUROG2	Q9H2A3	272 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	METTL14	Q9HCE5	456 aa	Known RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	FTSJ1	Q9UET6	329 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	ERVW-1	Q9UQF0	538 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	TMA7	Q9Y2S6	64 aa	Known RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	URB1	O60287	2271 aa	Known RBP	11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	NUMA1	Q14980	2115 aa		11.95	□□□□□ -0.5
CTNND1-238	ENST00000534647	EDDM13	A0A1B0GTR0	161 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647		A0A1W2PR77	199 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	TYW5	A2RUC4	315 aa	Known RBP	11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	RNF225	M0QZC1	329 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	P4HA2	O15460	535 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	SART1	O43290	800 aa	Known RBP	11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	SIN3B	O75182	1162 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	GOT1	P17174	413 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	FMO5	P49326	533 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	ATP1A2	P50993	1020 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	PMS1	P54277	932 aa	Known RBP	11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	TYRO3	Q06418	890 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	KCNJ12	Q14500	433 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	MEA1	Q16626	185 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	MS4A13	Q5J8X5	152 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	NCEH1	Q6PIU2	408 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	LAYN	Q6UX15	382 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	RETREG3	Q86VR2	466 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	CACTIN-AS1	Q8N1I8	211 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	LMO3	Q8TAP4	145 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	SAP25	Q8TEE9	199 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	FAM131C	Q96AQ9	280 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	MTG2	Q9H4K7	406 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	ERVMER34-1	Q9H9K5	563 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	EBF2	Q9HAK2	575 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	SERGEF	Q9UGK8	458 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	CNTN6	Q9UQ52	1028 aa		11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	COL5A1	P20908	1838 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNND1-238	ENST00000534647	GOLGA8CP	A6NN73	597 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	LAT	O43561	262 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	LUC7L3	O95232	432 aa	Known RBP	11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	MOCS3	O95396	460 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	WNT1	P04628	370 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	C5AR1	P21730	350 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	CD38	P28907	300 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLC8A1	P32418	973 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	GPD2	P43304	727 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	RXRG	P48443	463 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	RGS7	P49802	495 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	RPS24	P62847	133 aa	Known RBP	11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	ECT2L	Q008S8	904 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	GCNT1	Q02742	428 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	LRMP	Q12912	555 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	PNOC	Q13519	176 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	SLC12A1	Q13621	1099 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	SHB	Q15464	509 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	STX1A	Q16623	288 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	FSCB	Q5H9T9	825 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	PITRM1	Q5JRX3	1037 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	FOXR2	Q6PJQ5	311 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	DHRS13	Q6UX07	377 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	LYPD8	Q6UX82	237 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	MARCH9	Q86YJ5	346 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	RNF214	Q8ND24	703 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	DQX1	Q8TE96	717 aa	Known RBP	11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	GANC	Q8TET4	914 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	ZNF592	Q92610	1267 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	MYEOV	Q96EZ4	313 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	CEP63	Q96MT8	703 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	NT5C1B	Q96P26	610 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	OMD	Q99983	421 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	TRIM62	Q9BVG3	475 aa		11.93	□□□□□ -0.5
CTNND1-238	ENST00000534647	STIM2	Q9P246	746 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms