RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	TPH2	Q8IWU9	490 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	IGSF22	Q8N9C0	903 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	MCPH1	Q8NEM0	835 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	ERCC4	Q92889	916 aa	Predicted RBP	6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	ZC3H10	Q96K80	434 aa	Known RBP	6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	JAKMIP1	Q96N16	626 aa	Known RBP	6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	EIF2AK1	Q9BQI3	630 aa	Known RBP	6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	ADPGK	Q9BRR6	497 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	GPR88	Q9GZN0	384 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	C2orf40	Q9H1Z8	148 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	OR10A2	Q9H208	303 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	ARRDC1-AS1	Q9H2J1	176 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	CYP4F11	Q9HBI6	524 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	CEP72	Q9P209	647 aa		6.59	□□□□□ -1.35
PICALM-223	ENST00000534412	AKAP13	Q12802	2813 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	TCRBV16S1A1N1	A0A5B0	115 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	SLC38A8	A6NNN8	435 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412		I3L4J1	428 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	CYR61	O00622	381 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	USO1	O60763	962 aa	Known RBP	6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	MPIG6B	O95866	241 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	XRCC6	P12956	609 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	SDHA	P31040	664 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	HOXC13	P31276	330 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	ELF1	P32519	619 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	MPL	P40238	635 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	NAMPT	P43490	491 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	BRCC3	P46736	316 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	CCT2	P78371	535 aa	Known RBP	6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	IRF9	Q00978	393 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	TEAD2	Q15562	447 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	MAPK6	Q16659	721 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	NRN1L	Q496H8	165 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	TMEM177	Q53S58	311 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	KANK2	Q63ZY3	851 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	LARP4	Q71RC2	724 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	KBTBD6	Q86V97	674 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	TMC8	Q8IU68	726 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	ZBTB8OS	Q8IWT0	167 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	ELMOD1	Q8N336	334 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	BEST2	Q8NFU1	509 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	CSGALNACT1	Q8TDX6	532 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	AIFM3	Q96NN9	605 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	ASAH2	Q9NR71	780 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	VPS45	Q9NRW7	570 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	OBP2A	Q9NY56	170 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	AFF4	Q9UHB7	1163 aa	Known RBP	6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	FBXL5	Q9UKA1	691 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	SNX14	Q9Y5W7	946 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	B3GALT1	Q9Y5Z6	326 aa		6.58	□□□□□ -1.36
PICALM-223	ENST00000534412	SETX	Q7Z333	2677 aa	Known RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TICRR	Q7Z2Z1	1910 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	SMIM28	A0A1B0GU29	152 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	SRRM3	A6NNA2	597 aa	Predicted RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412		H7C4K7	107 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	PODXL	O00592	558 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	EXTL3	O43909	919 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	KCNE1	P15382	129 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	GJA1	P17302	382 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ACO1	P21399	889 aa	Known RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	APEX1	P27695	318 aa	Known RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	NOVA1	P51513	510 aa	Known RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	KPNA1	P52294	538 aa	Predicted RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TWF1	Q12792	350 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TOB2	Q14106	344 aa	Predicted RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	CCDC6	Q16204	474 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ARHGAP44	Q17R89	818 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ARHGAP29	Q52LW3	1261 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	EARS2	Q5JPH6	523 aa	Known RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TMEM200B	Q69YZ2	307 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TRIM68	Q6AZZ1	485 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TCEAL6	Q6IPX3	200 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ZNF280D	Q6N043	979 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ALKAL1	Q6UXT8	129 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	PIK3AP1	Q6ZUJ8	805 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	YAF2	Q8IY57	180 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	PIGO	Q8TEQ8	1089 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	DLG3	Q92796	817 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TCEAL3	Q969E4	200 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ZNF274	Q96GC6	653 aa	Predicted RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	ZNF512	Q96ME7	567 aa	Predicted RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	CCDC43	Q96MW1	224 aa	Known RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	LRRC3B	Q96PB8	259 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	SORCS2	Q96PQ0	1159 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	EDEM2	Q9BV94	578 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	BOC	Q9BWV1	1114 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	TOPORS	Q9NS56	1045 aa	Predicted RBP	6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	SLC38A7	Q9NVC3	462 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	GTSE1	Q9NYZ3	720 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	PCDHA12	Q9UN75	941 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	KCNJ14	Q9UNX9	436 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	GDA	Q9Y2T3	454 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	YIPF1	Q9Y548	306 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	SLC30A1	Q9Y6M5	507 aa		6.57	□□□□□ -1.36
PICALM-223	ENST00000534412	GREB1	Q4ZG55	1949 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	GCN1	Q92616	2671 aa	Known RBP	6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	STK36	Q9NRP7	1315 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	LNP1	A1A4G5	178 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	GOLGA6L22	H0YM25	854 aa		6.56	□□□□□ -1.36
PICALM-223	ENST00000534412	CPLX1	O14810	134 aa		6.56	□□□□□ -1.36

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