RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CFLARO15519 480 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 AMHP03971 560 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 IFRD2Q12894 506 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-226ENST00000533820 PPM1LQ5SGD2 360 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 TIFABQ6ZNK6 161 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 SAPCD2Q86UD0 394 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 ZNF567Q8N184 647 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 ZBTB8BQ8NAP8 495 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-226ENST00000533820 PPP2R3CQ969Q6 453 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 MARK4Q96L34 752 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 C1orf21Q9H246 121 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 KLHL8Q9P2G9 620 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-226ENST00000533820 PTPRFP10586 1907 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 NUP205Q92621 2012 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 SSC5DA1L4H1 1573 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 CLDN5O00501 218 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 FKBP6O75344 327 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 LTFP02788 710 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 GLRBP48167 497 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 MMEL1Q495T6 779 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 RAB3IL1Q8TBN0 382 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 MFSD3Q96ES6 412 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 GCOM2Q9BZD3 368 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-226ENST00000533820 GJD2Q9UKL4 321 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 ZNF711Q9Y462 761 aa19.77■□□□□ 0.76
CAPN1-226ENST00000533820 CHRNGP07510 517 aa19.77■□□□□ 0.75
CAPN1-226ENST00000533820 PGAM1P18669 254 aa19.77■□□□□ 0.75
CAPN1-226ENST00000533820 NDUFV1P49821 464 aa19.77■□□□□ 0.75
CAPN1-226ENST00000533820 MSLNQ13421 630 aaPredicted RBP19.77■□□□□ 0.75
CAPN1-226ENST00000533820 MED21Q13503 144 aa19.77■□□□□ 0.75
CAPN1-226ENST00000533820 CTU1Q7Z7A3 348 aaKnown RBP19.77■□□□□ 0.75
CAPN1-226ENST00000533820 APBB2Q92870 758 aa19.77■□□□□ 0.75
CAPN1-226ENST00000533820 CERS2Q96G23 380 aa19.77■□□□□ 0.75
CAPN1-226ENST00000533820 NR1H4Q96RI1 486 aaPredicted RBP19.77■□□□□ 0.75
CAPN1-226ENST00000533820 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.77■□□□□ 0.75
CAPN1-226ENST00000533820 CITO14578 2027 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 CAPN8A6NHC0 703 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 PGM3O95394 542 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 ZFXP17010 805 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 ACAT1P24752 427 aaKnown RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 NR2C2P49116 596 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 ADIGQ0VDE8 80 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 BTG3Q14201 252 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 TTLL4Q14679 1199 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 SH3D19Q5HYK7 790 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 DUS1LQ6P1R4 473 aaKnown RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 LRRC8BQ6P9F7 803 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 DNAJC1Q96KC8 554 aaKnown RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 LENG8Q96PV6 779 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 GPAMQ9HCL2 828 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 DDX43Q9NXZ2 648 aaKnown RBP19.76■□□□□ 0.75
CAPN1-226ENST00000533820 ADM5C9JUS6 153 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 MAGEB3O15480 346 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 CNMDO75829 334 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 POLBP06746 335 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 NUDT2P50583 147 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 GSTA3Q16772 222 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 PDSS2Q86YH6 399 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 BRD8Q9H0E9 1235 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 AK5Q9Y6K8 562 aa19.76■□□□□ 0.75
CAPN1-226ENST00000533820 ALDH1A2O94788 518 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 COX4I1P13073 169 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 CNTFP26441 200 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 EPHA3P29320 983 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 CERCAMQ5T4B2 595 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 NCCRP1Q6ZVX7 275 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 ARHGAP18Q8N392 663 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 RNF139Q8WU17 664 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 CMTM5Q96DZ9 223 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 KLHL4Q9C0H6 718 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 RBPJLQ9UBG7 517 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 MORF4L1Q9UBU8 362 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 ZNF638Q14966 1978 aaKnown RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 ZNF195O14628 629 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 MX2P20592 715 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 AVPR1AP37288 418 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 PKNOX1P55347 436 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 CCDC92Q53HC0 331 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 ZNF772Q68DY9 489 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 FSTL4Q6MZW2 842 aa19.75■□□□□ 0.75
CAPN1-226ENST00000533820 USP13Q92995 863 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 MPHOSPH6Q99547 160 aaKnown RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 NXF3Q9H4D5 531 aaKnown RBP19.75■□□□□ 0.75
CAPN1-226ENST00000533820 A0A096LPK6 155 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 M0QYT0 321 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 OR6B1O95007 311 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 MPSTP25325 297 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 FDFT1P37268 417 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 GP5P40197 560 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 PTPN9P43378 593 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 TTLL12Q14166 644 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-226ENST00000533820 STEAP4Q687X5 459 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 NXNQ6DKJ4 435 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 SLC26A9Q7LBE3 791 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 SPATA6LQ8N4H0 392 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 SPATA16Q9BXB7 569 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 ARHGEF38Q9NXL2 777 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 TMEM98Q9Y2Y6 226 aa19.74■□□□□ 0.75
CAPN1-226ENST00000533820 FAM72CH0Y354 149 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms