RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 KRT9P35527 623 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 PLK1P53350 603 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SIM1P81133 766 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 CDK17Q00537 523 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 ECT2LQ008S8 904 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SLC6A3Q01959 620 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 ACAP1Q15027 740 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 KRT31Q15323 416 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 TTC31Q49AM3 519 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 HSP90AA4PQ58FG1 418 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 OTUD1Q5VV17 481 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 OR6B2Q6IFH4 312 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 APTXQ7Z2E3 356 aaKnown RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 CIR1Q86X95 450 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 FAM71AQ8IYT1 594 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 ANKRD20A12PQ8NF67 263 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 PTPRN2Q92932 1015 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 BIRC7Q96CA5 298 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 NOX5Q96PH1 765 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 ORAI3Q9BRQ5 295 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 PABPC3Q9H361 631 aaKnown RBP11.67□□□□□ -0.54
CLCF1-202ENST00000533438 FAM204AQ9H8W3 233 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SGK2Q9HBY8 427 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 PLCB1Q9NQ66 1216 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SERGEFQ9UGK8 458 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SLC12A6Q9UHW9 1150 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 DOCK4Q8N1I0 1966 aa11.67□□□□□ -0.54
CLCF1-202ENST00000533438 SYNJ2BP-COX16A0A087WUM0 186 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 EDDM13A0A1B0GTR0 161 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 A0A1B0GVM2 712 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 TCAF2A6NFQ2 919 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 C10orf142B7Z368 130 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 MID1O15344 667 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 HYAL3O43820 417 aaPredicted RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 CBFA2T3O75081 653 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 TRIM16O95361 564 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 CER1O95813 267 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 PRKCSHP14314 528 aaPredicted RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 NOS2P35228 1153 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 MATKP42679 507 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 AFF3P51826 1226 aaKnown RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 FANCCQ00597 558 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 MTA1Q13330 715 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 DRAP1Q14919 205 aaPredicted RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 CST6Q15828 149 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 KLHDC7AQ5VTJ3 777 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 CXorf57Q6NSI4 855 aaKnown RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 FBXL22Q6P050 247 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 DBX2Q6ZNG2 339 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 NAXDQ8IW45 347 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 SNX19Q92543 992 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 ALG14Q96F25 216 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 RPL10LQ96L21 214 aaKnown RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 CAMK1GQ96NX5 476 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 FAM129BQ96TA1 746 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
CLCF1-202ENST00000533438 GAREM1Q9H706 876 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 TM9SF3Q9HD45 589 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 COX16Q9P0S2 106 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 SLCO3A1Q9UIG8 710 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 FHOD1Q9Y613 1164 aa11.66□□□□□ -0.54
CLCF1-202ENST00000533438 PTPRBP23467 1997 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 A0A1B0GTH6 734 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 A0A1B0GVT2 93 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 A0A1W2PP55 124 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 TAF4O00268 1085 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 RNASEH1O60930 286 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 SERPINC1P01008 464 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 IGHV4-34P06331 123 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 CYP11B1P15538 503 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 PDGFRAP16234 1089 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 CD27P26842 260 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 MZF1P28698 734 aaPredicted RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 GABRB2P47870 512 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 GRIA4P48058 902 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 CSNK1EP49674 416 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 STK19P49842 368 aaPredicted RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 IRAK1P51617 712 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 COPB1P53618 953 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 SNX16P57768 344 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 BPIFB4P59827 614 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 CENPCQ03188 943 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 SULT2A1Q06520 285 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 AUHQ13825 339 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 TRIP6Q15654 476 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 HLA-BQ31612 363 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 C5orf22Q49AR2 442 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 RABGAP1LQ5R372 815 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 KIAA0895LQ68EN5 471 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 ZDHHC17Q8IUH5 632 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 MMAAQ8IVH4 418 aaKnown RBP11.65□□□□□ -0.54
CLCF1-202ENST00000533438 OR52K2Q8NGK3 314 aa11.65□□□□□ -0.54
CLCF1-202ENST00000533438 FRS2Q8WU20 508 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms