RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 STK40Q8N2I9 435 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 AADATQ8N5Z0 425 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 CADM4Q8NFZ8 388 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 CEP76Q8TAP6 659 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 FRS2Q8WU20 508 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 FOXJ1Q92949 421 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 C18orf8Q96DM3 657 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 TKTL2Q9H0I9 626 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 PABPC3Q9H361 631 aaKnown RBP18.35■□□□□ 0.53
SMG1-203ENST00000532700 EBF2Q9HAK2 575 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 LIMA1Q9UHB6 759 aaKnown RBP18.35■□□□□ 0.53
SMG1-203ENST00000532700 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.35■□□□□ 0.53
SMG1-203ENST00000532700 DOCK9Q9BZ29 2069 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 SPAARA0A1B0GVQ0 90 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 C10orf142B7Z368 130 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 RNF103O00237 685 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 SEMA4FO95754 770 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 CYP1A1P04798 512 aaPredicted RBP18.34■□□□□ 0.53
SMG1-203ENST00000532700 IGHV4-34P06331 123 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 CSRP1P21291 193 aaKnown RBP18.34■□□□□ 0.53
SMG1-203ENST00000532700 SOX5P35711 763 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 DPP6P42658 865 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 PTP4A2Q12974 167 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 ARID5BQ14865 1188 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 C5orf22Q49AR2 442 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 WDR45BQ5MNZ6 344 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 SMYD5Q6GMV2 418 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 JOSD2Q8TAC2 188 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 SNX19Q92543 992 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 BIRC7Q96CA5 298 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 PSMB7Q99436 277 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 NAT10Q9H0A0 1025 aaKnown RBP18.34■□□□□ 0.53
SMG1-203ENST00000532700 METTL5Q9NRN9 209 aaKnown RBP18.34■□□□□ 0.53
SMG1-203ENST00000532700 MPP6Q9NZW5 540 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 SUN2Q9UH99 717 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 CEP83Q9Y592 693 aa18.34■□□□□ 0.53
SMG1-203ENST00000532700 A0A1W2PP55 124 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 LGALS16A8MUM7 142 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 LSM8O95777 96 aaKnown RBP18.33■□□□□ 0.52
SMG1-203ENST00000532700 DNTTP04053 509 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 SRPRAP08240 638 aaKnown RBP18.33■□□□□ 0.52
SMG1-203ENST00000532700 SLC2A3P11169 496 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 PSMD8P48556 350 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 CDR2Q01850 454 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 MYL5Q02045 173 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 TYRO3Q06418 890 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 CST6Q15828 149 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 SYCP2LQ5T4T6 812 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 ZDHHC17Q8IUH5 632 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 AOPEPQ8N6M6 819 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 PGAP3Q96FM1 320 aaPredicted RBP18.33■□□□□ 0.52
SMG1-203ENST00000532700 FEM1AQ9BSK4 669 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 NEUROG2Q9H2A3 272 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 DNAAF2Q9NVR5 837 aaKnown RBP18.33■□□□□ 0.52
SMG1-203ENST00000532700 ZNF212Q9UDV6 495 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 SARDHQ9UL12 918 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 SPEGQ15772 3267 aa18.33■□□□□ 0.52
SMG1-203ENST00000532700 FRYQ5TBA9 3013 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 A0A1B0GTW7 788 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 A0A1B0GVT2 93 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 WNT9AO14904 365 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 BCAT2O15382 392 aaPredicted RBP18.32■□□□□ 0.52
SMG1-203ENST00000532700 SNAP91O60641 907 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 MT-CO1P00395 513 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 GLDCP23378 1020 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 SCNN1AP37088 669 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 CSNK1EP49674 416 aaKnown RBP18.32■□□□□ 0.52
SMG1-203ENST00000532700 PLK1P53350 603 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 ST8SIA6P61647 398 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 DEUP1Q05D60 604 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 E2F5Q15329 346 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 C15orf59Q2T9L4 293 aaPredicted RBP18.32■□□□□ 0.52
SMG1-203ENST00000532700 SLC25A52Q3SY17 297 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 RABGAP1LQ5R372 815 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 RNF219Q5W0B1 726 aaPredicted RBP18.32■□□□□ 0.52
SMG1-203ENST00000532700 FAM131BQ86XD5 332 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 ZNF557Q8N988 423 aaPredicted RBP18.32■□□□□ 0.52
SMG1-203ENST00000532700 KDM1BQ8NB78 822 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 C11orf70Q9BRQ4 267 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 FBXL12Q9NXK8 326 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 SLC12A6Q9UHW9 1150 aa18.32■□□□□ 0.52
SMG1-203ENST00000532700 FNDC3AQ9Y2H6 1198 aaKnown RBP18.32■□□□□ 0.52
SMG1-203ENST00000532700 CHD8Q9HCK8 2581 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 A0A0D9SEW6 157 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 K7ERQ8 282 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 OPHN1O60890 802 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 FSBPO95073 299 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 CEACAM1P13688 526 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 MMP8P22894 467 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 DRD3P35462 400 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 GALCP54803 685 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 ATP11AP98196 1134 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 ZBTB16Q05516 673 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 FOXC1Q12948 553 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 POM121L1PQ3SYA9 428 aa18.31■□□□□ 0.52
SMG1-203ENST00000532700 TTC39BQ5VTQ0 682 aaPredicted RBP18.31■□□□□ 0.52
SMG1-203ENST00000532700 TFAP2DQ7Z6R9 452 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms