RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OTUD1Q5VV17 481 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-204ENST00000532550 LRSAM1Q6UWE0 723 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 APTXQ7Z2E3 356 aaKnown RBP17.75■□□□□ 0.43
PHRF1-204ENST00000532550 SLC30A5Q8TAD4 765 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 GANCQ8TET4 914 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 DNASE2BQ8WZ79 361 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 C1orf74Q96LT6 269 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 BPIFA3Q9BQP9 254 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 GTPBP2Q9BX10 602 aaKnown RBP17.75■□□□□ 0.43
PHRF1-204ENST00000532550 ADAM33Q9BZ11 813 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 BTBD1Q9H0C5 482 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 RSPH9Q9H1X1 276 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-204ENST00000532550 SCML1Q9UN30 329 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 NUMA1Q14980 2115 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 ASCC3Q8N3C0 2202 aaKnown RBP17.74■□□□□ 0.43
PHRF1-204ENST00000532550 ARHGAP33O14559 1287 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 CCDC172P0C7W6 258 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 GGCXP38435 758 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 NSFP46459 744 aaKnown RBP17.74■□□□□ 0.43
PHRF1-204ENST00000532550 NUMBP49757 651 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 C5orf22Q49AR2 442 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 C9orf64Q5T6V5 341 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 CXorf57Q6NSI4 855 aaKnown RBP17.74■□□□□ 0.43
PHRF1-204ENST00000532550 PHLDB2Q86SQ0 1253 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 CFAP57Q96MR6 1250 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 C11orf70Q9BRQ4 267 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 FEM1AQ9BSK4 669 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 MIR1-1HGQ9H1L0 117 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 PCED1AQ9H1Q7 454 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 CAPN10Q9HC96 672 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 METTL5Q9NRN9 209 aaKnown RBP17.74■□□□□ 0.43
PHRF1-204ENST00000532550 ADAMTS9Q9P2N4 1935 aa17.74■□□□□ 0.43
PHRF1-204ENST00000532550 MUC22E2RYF6 1773 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-204ENST00000532550 KCNK5O95279 499 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 UNGP13051 313 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-204ENST00000532550 ACSL1P33121 698 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 RDXP35241 583 aaKnown RBP17.73■□□□□ 0.43
PHRF1-204ENST00000532550 STK19P49842 368 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-204ENST00000532550 ZNF165P49910 485 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 ATP11AP98196 1134 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 EMC1Q8N766 993 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 HAPLN3Q96S86 360 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 PCDHB18PQ96TA0 734 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 MUC3BQ9H195 1237 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 SGK2Q9HBY8 427 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 FSCN3Q9NQT6 498 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 ANLNQ9NQW6 1124 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 SEPT11Q9NVA2 429 aaKnown RBP17.73■□□□□ 0.43
PHRF1-204ENST00000532550 ADAM22Q9P0K1 906 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 SLC25A13Q9UJS0 675 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 VPS28Q9UK41 221 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 TBC1D30Q9Y2I9 924 aa17.73■□□□□ 0.43
PHRF1-204ENST00000532550 ITIH6Q6UXX5 1313 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 CACNA1EQ15878 2313 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 A0A1B0GTW7 788 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 DRGXA6NNA5 263 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 TEX33O43247 280 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 SRGAP2O75044 1071 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 CNTN5O94779 1100 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 SEMA4FO95754 770 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 ADRB1P08588 477 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 FERP16591 822 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 SDC4P31431 198 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 IRAK1P51617 712 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 CLEC16AQ2KHT3 1053 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 ACCSLQ4AC99 568 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 TRNP1Q6NT89 227 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 USP30Q70CQ3 517 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 FAM131BQ86XD5 332 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 MMAAQ8IVH4 418 aaKnown RBP17.72■□□□□ 0.43
PHRF1-204ENST00000532550 HDDC3Q8N4P3 179 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 RXFP2Q8WXD0 754 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 SNX19Q92543 992 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 PTPRN2Q92932 1015 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 ALG14Q96F25 216 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 FAM129BQ96TA1 746 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 AGPAT1Q99943 283 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 OMDQ99983 421 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 PABPC3Q9H361 631 aaKnown RBP17.72■□□□□ 0.43
PHRF1-204ENST00000532550 C6orf106Q9H6K1 298 aaPredicted RBP17.72■□□□□ 0.43
PHRF1-204ENST00000532550 RTN4Q9NQC3 1192 aaKnown RBP17.72■□□□□ 0.43
PHRF1-204ENST00000532550 FBXL12Q9NXK8 326 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 EIF2B4Q9UI10 523 aaKnown RBP17.72■□□□□ 0.43
PHRF1-204ENST00000532550 SNX10Q9Y5X0 201 aa17.72■□□□□ 0.43
PHRF1-204ENST00000532550 I6L893 689 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-204ENST00000532550 OPHN1O60890 802 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 ENDOD1O94919 500 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 CALB1P05937 261 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 KRT3P12035 628 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 SLC8A1P32418 973 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 KRT83P78385 493 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 CST6Q15828 149 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 CDO1Q16878 200 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 ARL13BQ3SXY8 428 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 ALFQ53S48 1182 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 SH3PXD2AQ5TCZ1 1133 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 BNIPLQ7Z465 357 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 STK40Q8N2I9 435 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 ZCCHC9Q8N567 271 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms