RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CD38P28907 300 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 METAP1P53582 386 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 ADPRHP54922 357 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 KCNH2Q12809 1159 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 SFSWAPQ12872 951 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 DNAJC3Q13217 504 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 OR14C36Q8NHC7 312 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 TIGD1Q96MW7 591 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 SLC4A5Q9BY07 1137 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 HOOK1Q9UJC3 728 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 CNTN6Q9UQ52 1028 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 A0A1W2PR77 199 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 ADH1BP00325 375 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 IL1BP01584 269 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 IGLV3-25P01717 112 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 PDGFRAP16234 1089 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 GOT1P17174 413 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 ABCB4P21439 1286 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 MZF1P28698 734 aaPredicted RBP19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 ACADSBP45954 432 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 CCR5P51681 352 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 STX17P56962 302 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 PPP2CBP62714 309 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 PPP2CAP67775 309 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 NUCB2P80303 420 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 TAF5Q15542 800 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 SND1Q7KZF4 910 aaKnown RBP eCLIP19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 TRIM59Q8IWR1 403 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 CRELD1Q96HD1 420 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 SERAC1Q96JX3 654 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 BTN2A3PQ96KV6 586 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 POPDC2Q9HBU9 364 aa19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 UBE2TQ9NPD8 197 aaPredicted RBP19.02■□□□□ 0.64
SSSCA1-206ENST00000531405 KALRNO60229 2985 aa19.02■□□□□ 0.63
SSSCA1-206ENST00000531405 SYNJ2BP-COX16A0A087WUM0 186 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 F5H5T6 163 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 BIN1O00499 593 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 ENC1O14682 589 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 THAP12O43422 761 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 LDOC1O95751 146 aaPredicted RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 AFPP02771 609 aaKnown RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 ITGAVP06756 1048 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 C5AR1P21730 350 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 DRD3P35462 400 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 YWHAZP63104 245 aaKnown RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 BEND5Q7L4P6 421 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 EID2Q8N6I1 236 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 PDCD7Q8N8D1 485 aaKnown RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 SAP25Q8TEE9 199 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 SKA1Q96BD8 255 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 CNDP2Q96KP4 475 aaKnown RBP19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 SCUBE2Q9NQ36 999 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 GDF3Q9NR23 364 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 COX16Q9P0S2 106 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 DOCK4Q8N1I0 1966 aa19.01■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3DA0A087WVF3 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3IA0A087WXS9 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3EA0A087X179 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3KA0A087X1G2 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3FA6NER0 549 aaPredicted RBP19■□□□□ 0.63
SSSCA1-206ENST00000531405 KCNU1A8MYU2 1149 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3LB9A6J9 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3HP0C7X1 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 GNA15P30679 374 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 PPP1R2P41236 205 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 ELAVL3Q14576 367 aaKnown RBP19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3GQ6DHY5 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3CQ6IPX1 549 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 GJB7Q6PEY0 223 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TMEM110Q86TL2 294 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 TBC1D3Q8IZP1 549 aaPredicted RBP19■□□□□ 0.63
SSSCA1-206ENST00000531405 ATP6V0D2Q8N8Y2 350 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 STK32AQ8WU08 396 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 ZNF606Q8WXB4 792 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 BBC3Q96PG8 261 aaPredicted RBP19■□□□□ 0.63
SSSCA1-206ENST00000531405 PRMT1Q99873 361 aaKnown RBP19■□□□□ 0.63
SSSCA1-206ENST00000531405 TRIM62Q9BVG3 475 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 FAM204AQ9H8W3 233 aa19■□□□□ 0.63
SSSCA1-206ENST00000531405 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19■□□□□ 0.63
SSSCA1-206ENST00000531405 BICDL2A1A5D9 508 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 MED7O43513 233 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 RTN2O75298 545 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 EPHA8P29322 1005 aaPredicted RBP18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 MAT2AP31153 395 aaKnown RBP18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 IRAK1P51617 712 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 NXPH1P58417 271 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 CENPCQ03188 943 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 BNIP3Q12983 259 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 PDCLQ13371 301 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 EIF4EBP2Q13542 120 aaPredicted RBP18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 POM121L1PQ3SYA9 428 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 CXorf57Q6NSI4 855 aaKnown RBP18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 TMPRSS12Q86WS5 348 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 FRS2Q8WU20 508 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 DCBLD2Q96PD2 775 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 SRRTQ9BXP5 876 aaKnown RBP18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 THAP9Q9H5L6 903 aa18.99■□□□□ 0.63
SSSCA1-206ENST00000531405 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms