RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 NXPE2Q96DL1 559 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 CRELD1Q96HD1 420 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 DHTKD1Q96HY7 919 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-219ENST00000530495 BTN2A3PQ96KV6 586 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 TRIM62Q9BVG3 475 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 KDM4CQ9H3R0 1056 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 CNTN6Q9UQ52 1028 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 CEP83Q9Y592 693 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 SHROOM3Q8TF72 1996 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3DA0A087WVF3 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3IA0A087WXS9 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3EA0A087X179 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3KA0A087X1G2 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3FA6NER0 549 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3LB9A6J9 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 PSMA7O14818 248 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 IGLV3-25P01717 112 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 APOEP02649 317 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3HP0C7X1 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TACR2P21452 398 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 MZF1P28698 734 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 EPHA8P29322 1005 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 DRD3P35462 400 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 NNMTP40261 264 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 EIF2S3P41091 472 aaKnown RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 ACADVLP49748 655 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 PLK1P53350 603 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 NUCB2P80303 420 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 BNIP3Q12983 259 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 EIF4EBP2Q13542 120 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 ZC3H12AQ5D1E8 599 aaKnown RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 RAP1GAP2Q684P5 730 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3GQ6DHY5 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3CQ6IPX1 549 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 FBXL19Q6PCT2 694 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TBC1D3Q8IZP1 549 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 FRS2Q8WU20 508 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 ERCC4Q92889 916 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-219ENST00000530495 SMARCE1Q969G3 411 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 FAM131CQ96AQ9 280 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 DCBLD2Q96PD2 775 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 SLC4A5Q9BY07 1137 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 NRSN2Q9GZP1 204 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 ST7Q9NRC1 585 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 TJP2Q9UDY2 1190 aa15.41■□□□□ 0.06
CAPN1-219ENST00000530495 GCN1Q92616 2671 aaKnown RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 EIF4E1BA6NMX2 242 aaKnown RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 CAPN9O14815 690 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 IL1BP01584 269 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 ABCG1P45844 678 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 STK19P49842 368 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 CLDN6P56747 220 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 PPP2CBP62714 309 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 YWHAZP63104 245 aaKnown RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 PPP2CAP67775 309 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 SULT2A1Q06520 285 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 TARDBPQ13148 414 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 ILKQ13418 452 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 RTP5Q14D33 572 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 CCDC40Q4G0X9 1142 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 SFMBT2Q5VUG0 894 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 NAPEPLDQ6IQ20 393 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 KANSL1Q7Z3B3 1105 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 TMEM110Q86TL2 294 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 PRPF39Q86UA1 669 aaKnown RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 IQCHQ86VS3 1027 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 SPATS2Q86XZ4 545 aaKnown RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 ARHGEF19Q8IW93 802 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 CACTIN-AS1Q8N1I8 211 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 OXR1Q8N573 874 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 KREMEN1Q96MU8 473 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 PRMT1Q99873 361 aaKnown RBP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 POPDC2Q9HBU9 364 aa15.4■□□□□ 0.06
CAPN1-219ENST00000530495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.4■□□□□ 0.06
CAPN1-219ENST00000530495 KCNU1A8MYU2 1149 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 F5H5T6 163 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 SLC7A4O43246 635 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 TRUB2O95900 331 aaKnown RBP15.39■□□□□ 0.05
CAPN1-219ENST00000530495 VAV1P15498 845 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
CAPN1-219ENST00000530495 CKMT2P17540 419 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 ITPKBP27987 946 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 NUDT1P36639 197 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 OXCT1P55809 520 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 OVGP1Q12889 678 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 STIM1Q13586 685 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 MEA1Q16626 185 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 HES3Q5TGS1 186 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 DENND1BQ6P3S1 775 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 CHSY1Q86X52 802 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 CCAR2Q8N163 923 aaKnown RBP15.39■□□□□ 0.05
CAPN1-219ENST00000530495 ATP6V0D2Q8N8Y2 350 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 PIP4K2CQ8TBX8 421 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 TIGD1Q96MW7 591 aa15.39■□□□□ 0.05
CAPN1-219ENST00000530495 MED15Q96RN5 788 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms