RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 HTR4Q13639 388 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 EML3Q32P44 896 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 FYB2Q5VWT5 728 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 NAIF1Q69YI7 327 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 VSIG1Q86XK7 387 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 MFN1Q8IWA4 741 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ARHGAP12Q8IWW6 846 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 FAM217AQ8IXS0 508 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TAB3Q8N5C8 712 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 CCNYQ8ND76 341 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 OR7D4Q8NG98 312 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 UBE2Q2Q8WVN8 375 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 IRF7Q92985 503 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 HMCESQ96FZ2 354 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TRPV4Q9HBA0 871 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 SPHK2Q9NRA0 654 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TMEM248Q9NWD8 314 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 GTSE1Q9NYZ3 720 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 SEPT10Q9P0V9 454 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TBC1D14Q9P2M4 693 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 ZNF212Q9UDV6 495 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 LIMD1Q9UGP4 676 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 F5H423 210 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 GFRA2O00451 464 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 LIASO43766 372 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 LUC7L3O95232 432 aaKnown RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 CYBBP04839 570 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TYRP14679 529 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 COL9A1P20849 921 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 GLDCP23378 1020 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 SERPINB6P35237 376 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ZNF135P52742 658 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 NUBP1P53384 320 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 CDH4P55283 916 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 AP1B1Q10567 949 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 MTA1Q13330 715 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ZNF177Q13360 481 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 PAFAH1B3Q15102 231 aaKnown RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 NOMO1Q15155 1222 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 DHCR24Q15392 516 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TRIP13Q15645 432 aaPredicted RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 AAK1Q2M2I8 961 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 MPPE1Q53F39 396 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 CXorf57Q6NSI4 855 aaKnown RBP10.93□□□□□ -0.66
SOX6-213ENST00000530378 RHBDF2Q6PJF5 856 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 C12orf40Q86WS4 652 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 MFSD6LQ8IWD5 586 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 CPXM2Q8N436 756 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ATPAF2Q8N5M1 289 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TMEM121Q9BTD3 319 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 SPON2Q9BUD6 331 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 SLC39A8Q9C0K1 460 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 MUC3BQ9H195 1237 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 HPS4Q9NQG7 708 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 TMEM51Q9NW97 253 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 RNF14Q9UBS8 474 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 AMACRQ9UHK6 382 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 EFR3BQ9Y2G0 817 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ACTL7AQ9Y615 435 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 ATG2BQ96BY7 2078 aa10.93□□□□□ -0.66
SOX6-213ENST00000530378 RASA4BC9J798 803 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 SLC9A3R1O14745 358 aaPredicted RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 RASA4O43374 803 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 RAMP2O60895 175 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 CLDN11O75508 207 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 RBP3P10745 1247 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 ADH5P11766 374 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 ETS1P14921 441 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 VAV1P15498 845 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 TCF3P15923 654 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 ZFXP17010 805 aaPredicted RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 PSMC3P17980 439 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 MZF1P28698 734 aaPredicted RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 CD70P32970 193 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 HTR7P34969 479 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 CSKP41240 450 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 SOX9P48436 509 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 VPS41P49754 854 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 PAPOLAP51003 745 aaKnown RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 GDF10P55107 478 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 KDSRQ06136 332 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 TUBB2AQ13885 445 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 BYSLQ13895 437 aaKnown RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 SMAD2Q15796 467 aaKnown RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 LEXMQ3ZCV2 418 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 C5orf22Q49AR2 442 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 RNF219Q5W0B1 726 aaPredicted RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 ASTLQ6HA08 431 aaPredicted RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 DARS2Q6PI48 645 aaKnown RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 CCDC137Q6PK04 289 aaKnown RBP10.92□□□□□ -0.66
SOX6-213ENST00000530378 CHST9Q7L1S5 443 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 CCDC105Q8IYK2 499 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 ADGRG2Q8IZP9 1017 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.92□□□□□ -0.66
SOX6-213ENST00000530378 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
SOX6-213ENST00000530378 MAIP1Q8WWC4 291 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms