RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 FZD10Q9ULW2 581 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 ERVW-1Q9UQF0 538 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 DMDP11532 3685 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 FAM72CH0Y354 149 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 SYNCRIPO60506 623 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 CYP1A2P05177 515 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 EPHX1P07099 455 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 HLA-EP13747 358 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 OR1E1P30953 314 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 L1CAMP32004 1257 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 CTSOP43234 321 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 SULT2A1Q06520 285 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 EFHC2Q5JST6 749 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 FAM72AQ5TYM5 149 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 RNF219Q5W0B1 726 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 FAM72DQ6L9T8 149 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 PRR23BQ6ZRT6 265 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 CEP68Q76N32 757 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 SETD3Q86TU7 594 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 FAM72BQ86X60 149 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 ARFGAP1Q8N6T3 406 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 SUN2Q9UH99 717 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 SMG5Q9UPR3 1016 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
CCDC90B-216ENST00000529856 MUC22E2RYF6 1773 aaPredicted RBP13.02□□□□□ -0.32
CCDC90B-216ENST00000529856 DCLK1O15075 740 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 AKR1B10O60218 316 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 RNF8O76064 485 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 LRIG2O94898 1065 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 RHOCP08134 193 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 NDUFV2P19404 249 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 P2RY2P41231 377 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 ST8SIA6P61647 398 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 BYSLQ13895 437 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 ACAP1Q15027 740 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 LPAL2Q16609 132 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 C6orf118Q5T5N4 469 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 TFAP2DQ7Z6R9 452 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 PYROXD2Q8N2H3 581 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 TC2NQ8N9U0 490 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 ARHGEF26Q96DR7 871 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 ZC3H10Q96K80 434 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 RPL10LQ96L21 214 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 NCAPGQ9BPX3 1015 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 NUP85Q9BW27 656 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 MKRN2Q9H000 416 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 MUC3BQ9H195 1237 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 NHEJ1Q9H9Q4 299 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 PRSS16Q9NQE7 514 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 SLCO3A1Q9UIG8 710 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 INVSQ9Y283 1065 aa13.02□□□□□ -0.33
CCDC90B-216ENST00000529856 USP34Q70CQ2 3546 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 ILVBLA1L0T0 632 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 C7P10643 843 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 RHOQP17081 205 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 MIPP30301 263 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 COPAP53621 1224 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 PLK5Q496M5 336 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 ERMARDQ5T6L9 678 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 LAIR1Q6GTX8 287 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 ZNF783Q6ZMS7 281 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 KBTBD6Q86V97 674 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 NLRP14Q86W24 1093 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 TMPRSS6Q8IU80 811 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 FAM160A2Q8N612 972 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 FRMD1Q8N878 549 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 OR2T3Q8NH03 318 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 RLN3Q8WXF3 142 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 RUBCNQ92622 972 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 TBC1D31Q96DN5 1066 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 PSMB7Q99436 277 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 DUSP15Q9H1R2 295 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 PCSK1NQ9UHG2 260 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 VPS28Q9UK41 221 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 NEU3Q9UQ49 428 aa13.01□□□□□ -0.33
CCDC90B-216ENST00000529856 SPAG17Q6Q759 2223 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 A0A0D9SEW6 157 aa13□□□□□ -0.33
CCDC90B-216ENST00000529856 TTC34A8MYJ7 566 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms