RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ADH1BP00325 375 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 SLC11A2P49281 568 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 RGS7P49802 495 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 TBX4P57082 545 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 SLC8A3P57103 927 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 DAOAP59103 153 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 SRSF1Q07955 248 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSRP1-204ENST00000529002 CDH18Q13634 790 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 FOXD4L6Q3SYB3 417 aaPredicted RBP19.62■□□□□ 0.73
SSRP1-204ENST00000529002 C3orf38Q5JPI3 329 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 MSANTD2Q6P1R3 559 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 FOXD4L3Q6VB84 417 aaPredicted RBP19.62■□□□□ 0.73
SSRP1-204ENST00000529002 SIX6OS1Q8N1H7 587 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 SNRNP27Q8WVK2 155 aaKnown RBP19.62■□□□□ 0.73
SSRP1-204ENST00000529002 APOLD1Q96LR9 279 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 DEPDC7Q96QD5 511 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 DNAI2Q9GZS0 605 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 XPO7Q9UIA9 1087 aaKnown RBP19.62■□□□□ 0.73
SSRP1-204ENST00000529002 SATB2Q9UPW6 733 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 U3KQA8 63 aa19.62■□□□□ 0.73
SSRP1-204ENST00000529002 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 SRPRAP08240 638 aaKnown RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 ERVPABLB-1P60509 514 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 NFKB2Q00653 900 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 ECT2LQ008S8 904 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 BST2Q10589 180 aaKnown RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 DCAF6Q58WW2 860 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 FOXD4L5Q5VV16 416 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 IQCHQ86VS3 1027 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 LSMEM2Q8N112 164 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 CCDC150Q8NCX0 1101 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 FOXD4L4Q8WXT5 416 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 KLHDC7BQ96G42 594 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 FCRL2Q96LA5 508 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 ZSCAN16Q9H4T2 348 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-204ENST00000529002 TMEM8AQ9HCN3 771 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 SSUH2Q9Y2M2 353 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 TRPM6Q9BX84 2022 aa19.61■□□□□ 0.73
SSRP1-204ENST00000529002 AHCTF1Q8WYP5 2266 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 CASC3O15234 703 aaKnown RBP19.6■□□□□ 0.73
SSRP1-204ENST00000529002 IRAK2O43187 625 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 PLRG1O43660 514 aaKnown RBP19.6■□□□□ 0.73
SSRP1-204ENST00000529002 LUC7L3O95232 432 aaKnown RBP19.6■□□□□ 0.73
SSRP1-204ENST00000529002 THEGLP0DJG4 465 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 CKMT1AP12532 417 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 CD19P15391 556 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 PRLRP16471 622 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 NR2F2P24468 414 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 CNTN1Q12860 1018 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 NFATC3Q12968 1075 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 ZNF542PQ5EBM4 170 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 MS4A13Q5J8X5 152 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 NUGGCQ68CJ6 796 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 UNC45BQ8IWX7 931 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 FAM186BQ8IYM0 893 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 EXD3Q8N9H8 876 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 KDM1BQ8NB78 822 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 EEF2KMTQ96G04 330 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 DPH1Q9BZG8 443 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 FZD3Q9NPG1 666 aa19.6■□□□□ 0.73
SSRP1-204ENST00000529002 K7ENP7 123 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 SLC31A1O15431 190 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 MAGEC1O60732 1142 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 NEBLO76041 1014 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 MOCS2O96007 188 aaPredicted RBP19.59■□□□□ 0.73
SSRP1-204ENST00000529002 KRT13P13646 458 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 SGO2Q562F6 1265 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 AGBL4Q5VU57 503 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 RNF219Q5W0B1 726 aaPredicted RBP19.59■□□□□ 0.73
SSRP1-204ENST00000529002 INO80CQ6PI98 192 aaPredicted RBP19.59■□□□□ 0.73
SSRP1-204ENST00000529002 INTS8Q75QN2 995 aaKnown RBP19.59■□□□□ 0.73
SSRP1-204ENST00000529002 FAM131CQ96AQ9 280 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 PAGE5Q96GU1 130 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 ATXN7L3BQ96GX2 97 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 NOX5Q96PH1 765 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 THSD1Q9NS62 852 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 HESX1Q9UBX0 185 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 MAPK8IP1Q9UQF2 711 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 TRAF3IP3Q9Y228 551 aa19.59■□□□□ 0.73
SSRP1-204ENST00000529002 MAPK13O15264 365 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 CALUO43852 315 aaPredicted RBP19.58■□□□□ 0.72
SSRP1-204ENST00000529002 PIAS2O75928 621 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 CALCAP01258 141 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 TGM2P21980 687 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 CSRP3P50461 194 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 KCNMA1Q12791 1236 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 OVGP1Q12889 678 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 ELAVL3Q14576 367 aaKnown RBP19.58■□□□□ 0.72
SSRP1-204ENST00000529002 ISXQ2M1V0 245 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 KRT39Q6A163 491 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 FOXR1Q6PIV2 292 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 TRIM69Q86WT6 500 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 LGI2Q8N0V4 545 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 ZNF557Q8N988 423 aaPredicted RBP19.58■□□□□ 0.72
SSRP1-204ENST00000529002 KCTD13Q8WZ19 329 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 CNGB3Q9NQW8 809 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 IL17BQ9UHF5 180 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 PCDHA7Q9UN72 937 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 DMTF1Q9Y222 760 aa19.58■□□□□ 0.72
SSRP1-204ENST00000529002 COL12A1Q99715 3063 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms