RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MPP7Q5T2T1 576 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 PEAR1Q5VY43 1037 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-218ENST00000528877 EGFLAMQ63HQ2 1017 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 NUGGCQ68CJ6 796 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 ANO7Q6IWH7 933 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 DPY19L2P1Q6NXN4 242 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 GBP6Q6ZN66 633 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 TPGS1Q6ZTW0 290 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 TOGARAM2Q6ZUX3 1019 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 ANKS1BQ7Z6G8 1248 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 KIAA0907Q7Z7F0 614 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-218ENST00000528877 TMEM110Q86TL2 294 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 DENND1CQ8IV53 801 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.35□□□□□ -1.232e-8■■■□□ 14.6
ITGB1-218ENST00000528877 NAT16Q8N8M0 369 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 UBA3Q8TBC4 463 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 RNF139Q8WU17 664 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 AZIN2Q96A70 460 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 RTKNQ9BST9 563 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 SIX2Q9NPC8 291 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 VPS45Q9NRW7 570 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 LMBRD1Q9NUN5 540 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 TNRC6BQ9UPQ9 1833 aaKnown RBP7.35□□□□□ -1.23
ITGB1-218ENST00000528877 MYOFQ9NZM1 2061 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CKAP5Q14008 2032 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 TCRBV21S2A2A0A5A6 115 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 BCLAF3A2AJT9 711 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 LINC01387J3KSC0 135 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 TRIM24O15164 1050 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 MSI1O43347 362 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CYBBP04839 570 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 FYNP06241 537 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 GLI1P08151 1106 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 KRT5P13647 590 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 LCP1P13796 627 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 GABRG2P18507 467 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 EEF1GP26641 437 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 GNA15P30679 374 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CD68P34810 354 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 DPP6P42658 865 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 RGS7P49802 495 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 EIF4EBP2Q13542 120 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 BYSLQ13895 437 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 MPPE1Q53F39 396 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 FAM133BQ5BKY9 247 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 ADGRF1Q5T601 910 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 EMC10Q5UCC4 262 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 DENND1BQ6P3S1 775 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 DGLUCYQ7Z3D6 616 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CCDC33Q8N5R6 958 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 ZNF557Q8N988 423 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 DQX1Q8TE96 717 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 WFIKKN2Q8TEU8 576 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CLEC4CQ8WTT0 213 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 ZNF606Q8WXB4 792 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 GOLGA1Q92805 767 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 SLC39A13Q96H72 371 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 FCRL2Q96LA5 508 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 SERPINB11Q96P15 392 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 TPSD1Q9BZJ3 242 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 NDST4Q9H3R1 872 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 OSGEPQ9NPF4 335 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 ASNSD1Q9NWL6 643 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CALCOCO1Q9P1Z2 691 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 THAP10Q9P2Z0 257 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 EVLQ9UI08 416 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CYTH4Q9UIA0 394 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.34□□□□□ -1.23
ITGB1-218ENST00000528877 EPG5Q9HCE0 2579 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 CHD8Q9HCK8 2581 aa7.34□□□□□ -1.23
ITGB1-218ENST00000528877 E5RJQ4 531 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 EREGO14944 169 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 DCLK1O15075 740 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 PAPSS1O43252 624 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-218ENST00000528877 ZNF217O75362 1048 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 LETM1O95202 739 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-218ENST00000528877 CALCAP01258 141 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 IGLV3-19P01714 112 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 HMBSP08397 361 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 SLC9A1P19634 815 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 BCKDHBP21953 392 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
ITGB1-218ENST00000528877 SLC11A2P49281 568 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 ARL4DP49703 201 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 GEN1Q17RS7 908 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 VWA3BQ502W6 1294 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 PIK3R6Q5UE93 754 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 CDKAL1Q5VV42 579 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 GJB7Q6PEY0 223 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 OLFML1Q6UWY5 402 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 UNC45BQ8IWX7 931 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 FAM71AQ8IYT1 594 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 CHPFQ8IZ52 775 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 HJURPQ8NCD3 748 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-218ENST00000528877 IPO4Q8TEX9 1081 aaKnown RBP7.33□□□□□ -1.24
ITGB1-218ENST00000528877 HMGB4Q8WW32 186 aa7.33□□□□□ -1.24
ITGB1-218ENST00000528877 NDRG1Q92597 394 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms