RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MYO18A	Q92614	2054 aa	Known RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	EML5	Q05BV3	1969 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	MUC22	E2RYF6	1773 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	IGLV3-10	A0A075B6K4	115 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	DCDC2B	A2VCK2	349 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	LRRC53	A6NM62	1247 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	DRGX	A6NNA5	263 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362		E9PAM4	449 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	SIN3B	O75182	1162 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	SERPINC1	P01008	464 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	CALB1	P05937	261 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	CCDC172	P0C7W6	258 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	KRT3	P12035	628 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	PTMS	P20962	102 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	OXTR	P30559	389 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	SDC4	P31431	198 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	RFC1	P35251	1148 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	DPP6	P42658	865 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	PTPN9	P43378	593 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	OXCT1	P55809	520 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	IRX4	P78413	519 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZBTB16	Q05516	673 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	C1QBP	Q07021	282 aa	Known RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF177	Q13360	481 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	CDO1	Q16878	200 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZSCAN23	Q3MJ62	389 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	TRIM61	Q5EBN2	209 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	C9orf64	Q5T6V5	341 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF776	Q68DI1	518 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	FAM124A	Q86V42	546 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	C3orf20	Q8ND61	904 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	HAPLN3	Q96S86	360 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	FEM1A	Q9BSK4	669 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	GPR174	Q9BXC1	333 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	TAS2R14	Q9NYV8	317 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	MPP6	Q9NZW5	540 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	ABCA7	Q8IZY2	2146 aa		12.1	□□□□□ -0.47
PSMC3-205	ENST00000528362	NCOR2	Q9Y618	2525 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	MED19	A0JLT2	244 aa	Predicted RBP	12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	TM4SF5	O14894	197 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	VAV1	P15498	845 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	FANCC	Q00597	558 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	SULT2A1	Q06520	285 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	NR1I3	Q14994	352 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	ASIC2	Q16515	512 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	RNF219	Q5W0B1	726 aa	Predicted RBP	12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	STRADA	Q7RTN6	431 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	TFAP2D	Q7Z6R9	452 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	MCOLN2	Q8IZK6	566 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	CADM4	Q8NFZ8	388 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	FRS2	Q8WU20	508 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	CENPI	Q92674	756 aa	Predicted RBP	12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	FOXJ1	Q92949	421 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	PSMB7	Q99436	277 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	NUP58	Q9BVL2	599 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	SELENOO	Q9BVL4	669 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	FSCN3	Q9NQT6	498 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	ZNF212	Q9UDV6	495 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	VPS28	Q9UK41	221 aa		12.09	□□□□□ -0.47
PSMC3-205	ENST00000528362	EDDM13	A0A1B0GTR0	161 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	TARSL2	A2RTX5	802 aa	Known RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SIGLEC16	A6NMB1	481 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	CDX4	O14627	284 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SRGAP2	O75044	1071 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	DNTT	P04053	509 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	CFI	P05156	583 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	RHOC	P08134	193 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	RRM1	P23921	792 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	MAOB	P27338	520 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	ACSL1	P33121	698 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	ADRA1B	P35368	520 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	PBX1	P40424	430 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	VASP	P50552	380 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	HDAC4	P56524	1084 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	TPM4	P67936	248 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	DUOXA1	Q1HG43	343 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	TTC31	Q49AM3	519 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	PPP1R15B	Q5SWA1	713 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SYCP2L	Q5T4T6	812 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	MANEAL	Q5VSG8	457 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	IL31	Q6EBC2	164 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	ACAD10	Q6JQN1	1059 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	DNAJC24	Q6P3W2	148 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SLC23A3	Q6PIS1	610 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	WDR59	Q6PJI9	974 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	LRRC31	Q6UY01	552 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	SETD3	Q86TU7	594 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	STK40	Q8N2I9	435 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	CEP76	Q8TAP6	659 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	FAM172A	Q8WUF8	416 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	DNASE2B	Q8WZ79	361 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	PTPRN2	Q92932	1015 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	MCEE	Q96PE7	176 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	FAM129B	Q96TA1	746 aa		12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	NUSAP1	Q9BXS6	441 aa	Known RBP	12.08	□□□□□ -0.48
PSMC3-205	ENST00000528362	MUC3B	Q9H195	1237 aa		12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms